Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 MIR1233-2-201ENST00000408138 82 ntBASIC12.57□□□□□ -0.4
NICN1Q9BSH3 MIR1233-1-201ENST00000408722 82 ntBASIC12.57□□□□□ -0.4
NICN1Q9BSH3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 MRPS18AP1-201ENST00000414458 589 ntBASIC12.57□□□□□ -0.4
NICN1Q9BSH3 AC055876.3-201ENST00000431496 288 ntBASIC12.57□□□□□ -0.4
NICN1Q9BSH3 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.57□□□□□ -0.4
NICN1Q9BSH3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 AC138649.4-201ENST00000612222 287 ntBASIC12.57□□□□□ -0.4
NICN1Q9BSH3 AL603764.1-201ENST00000636452 321 ntBASIC12.57□□□□□ -0.4
NICN1Q9BSH3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 AL138725.1-201ENST00000407347 1314 ntBASIC12.57□□□□□ -0.4
NICN1Q9BSH3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 RN7SKP230-201ENST00000365642 335 ntBASIC12.56□□□□□ -0.4
NICN1Q9BSH3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 FO681548.1-201ENST00000455617 1132 ntBASIC12.56□□□□□ -0.4
NICN1Q9BSH3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 AL359711.2-201ENST00000563105 872 ntBASIC12.56□□□□□ -0.4
NICN1Q9BSH3 RRP7BP-205ENST00000566851 833 ntBASIC12.56□□□□□ -0.4
NICN1Q9BSH3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 AC008761.3-201ENST00000624803 892 ntBASIC12.56□□□□□ -0.4
NICN1Q9BSH3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 AC027612.1-201ENST00000445234 2395 ntBASIC12.56□□□□□ -0.4
NICN1Q9BSH3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NICN1Q9BSH3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms