Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 TCAF1P1-201ENST00000414990 2232 ntBASIC13.26□□□□□ -0.29
USB1Q9BQ65 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 FAM8A4P-201ENST00000435433 1213 ntBASIC13.26□□□□□ -0.29
USB1Q9BQ65 AL354989.2-201ENST00000435838 1540 ntBASIC13.26□□□□□ -0.29
USB1Q9BQ65 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 FTLP10-202ENST00000505798 471 ntBASIC13.26□□□□□ -0.29
USB1Q9BQ65 AC091951.1-201ENST00000512854 2465 ntBASIC13.26□□□□□ -0.29
USB1Q9BQ65 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 AC006504.5-208ENST00000588784 2401 ntBASIC13.26□□□□□ -0.29
USB1Q9BQ65 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 VN1R11P-201ENST00000407795 868 ntBASIC13.25□□□□□ -0.29
USB1Q9BQ65 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 HOMER2P2-201ENST00000451621 847 ntBASIC13.25□□□□□ -0.29
USB1Q9BQ65 Z93015.1-201ENST00000451718 390 ntBASIC13.25□□□□□ -0.29
USB1Q9BQ65 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 IL12A-205ENST00000480787 863 ntTSL 3 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 RN7SL560P-201ENST00000577943 264 ntBASIC13.25□□□□□ -0.29
USB1Q9BQ65 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 AC008507.2-201ENST00000588402 1176 ntBASIC13.25□□□□□ -0.29
USB1Q9BQ65 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 AC083964.1-201ENST00000607549 630 ntBASIC13.25□□□□□ -0.29
USB1Q9BQ65 ZACNP1-201ENST00000612259 710 ntBASIC13.25□□□□□ -0.29
USB1Q9BQ65 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.25□□□□□ -0.29
USB1Q9BQ65 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 AC106730.3-201ENST00000624568 641 ntBASIC13.25□□□□□ -0.29
USB1Q9BQ65 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 AC112693.3-201ENST00000624819 1983 ntBASIC13.25□□□□□ -0.29
USB1Q9BQ65 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms