Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ABCA3Q99758 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
ABCA3Q99758 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ABCA3Q99758 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ABCA3Q99758 AC089987.1-201ENST00000551654 2209 ntBASIC18.54■□□□□ 0.56
ABCA3Q99758 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ABCA3Q99758 RN7SKP212-201ENST00000410851 328 ntBASIC18.54■□□□□ 0.56
ABCA3Q99758 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
ABCA3Q99758 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ABCA3Q99758 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ABCA3Q99758 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC18.54■□□□□ 0.56
ABCA3Q99758 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
ABCA3Q99758 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ABCA3Q99758 AL139424.3-202ENST00000641619 917 ntBASIC18.54■□□□□ 0.56
ABCA3Q99758 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.54■□□□□ 0.56
ABCA3Q99758 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ABCA3Q99758 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ABCA3Q99758 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ABCA3Q99758 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC18.54■□□□□ 0.56
ABCA3Q99758 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ABCA3Q99758 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ABCA3Q99758 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ABCA3Q99758 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ABCA3Q99758 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ABCA3Q99758 AC026471.1-201ENST00000564629 3026 ntBASIC18.53■□□□□ 0.56
ABCA3Q99758 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ABCA3Q99758 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ABCA3Q99758 KRT8P42-201ENST00000405771 1399 ntBASIC18.53■□□□□ 0.56
ABCA3Q99758 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ABCA3Q99758 AC011477.7-201ENST00000617163 1440 ntBASIC18.53■□□□□ 0.56
ABCA3Q99758 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ABCA3Q99758 CCL19-202ENST00000378800 414 ntTSL 2 BASIC18.53■□□□□ 0.56
ABCA3Q99758 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ABCA3Q99758 RPL18AP15-201ENST00000430258 517 ntBASIC18.53■□□□□ 0.56
ABCA3Q99758 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC18.53■□□□□ 0.56
ABCA3Q99758 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC18.53■□□□□ 0.56
ABCA3Q99758 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC18.53■□□□□ 0.56
ABCA3Q99758 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ABCA3Q99758 RN7SL300P-201ENST00000582522 318 ntBASIC18.53■□□□□ 0.56
ABCA3Q99758 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC18.53■□□□□ 0.56
ABCA3Q99758 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC18.53■□□□□ 0.56
ABCA3Q99758 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC18.53■□□□□ 0.56
ABCA3Q99758 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC18.53■□□□□ 0.56
ABCA3Q99758 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC18.53■□□□□ 0.56
ABCA3Q99758 AC138627.1-201ENST00000641127 1257 ntBASIC18.53■□□□□ 0.56
ABCA3Q99758 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ABCA3Q99758 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.53■□□□□ 0.56
ABCA3Q99758 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ABCA3Q99758 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.53■□□□□ 0.56
ABCA3Q99758 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC18.53■□□□□ 0.56
ABCA3Q99758 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ABCA3Q99758 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ABCA3Q99758 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ABCA3Q99758 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ABCA3Q99758 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ABCA3Q99758 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ABCA3Q99758 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ABCA3Q99758 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ABCA3Q99758 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ABCA3Q99758 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ABCA3Q99758 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC18.52■□□□□ 0.56
ABCA3Q99758 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC18.52■□□□□ 0.56
ABCA3Q99758 MIR1226-201ENST00000408658 75 ntBASIC18.52■□□□□ 0.56
ABCA3Q99758 AL954722.1-201ENST00000431238 259 ntBASIC18.52■□□□□ 0.56
ABCA3Q99758 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC18.52■□□□□ 0.56
ABCA3Q99758 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC18.52■□□□□ 0.56
ABCA3Q99758 OR4C14P-201ENST00000440929 923 ntBASIC18.52■□□□□ 0.56
ABCA3Q99758 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC18.52■□□□□ 0.56
ABCA3Q99758 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC18.52■□□□□ 0.56
ABCA3Q99758 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC18.52■□□□□ 0.56
ABCA3Q99758 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ABCA3Q99758 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ABCA3Q99758 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC18.52■□□□□ 0.56
ABCA3Q99758 SNX20-205ENST00000610485 557 ntTSL 5 BASIC18.52■□□□□ 0.56
ABCA3Q99758 AL450487.2-201ENST00000615934 407 ntBASIC18.52■□□□□ 0.56
ABCA3Q99758 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ABCA3Q99758 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC18.52■□□□□ 0.56
ABCA3Q99758 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ABCA3Q99758 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ABCA3Q99758 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ABCA3Q99758 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ABCA3Q99758 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
ABCA3Q99758 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC18.52■□□□□ 0.55
ABCA3Q99758 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.52■□□□□ 0.55
ABCA3Q99758 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
ABCA3Q99758 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
ABCA3Q99758 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC18.52■□□□□ 0.55
ABCA3Q99758 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC18.52■□□□□ 0.55
ABCA3Q99758 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC18.52■□□□□ 0.55
ABCA3Q99758 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC18.52■□□□□ 0.55
ABCA3Q99758 RN7SL480P-201ENST00000581481 294 ntBASIC18.52■□□□□ 0.55
ABCA3Q99758 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ABCA3Q99758 AL590556.2-202ENST00000636906 844 ntBASIC18.52■□□□□ 0.55
ABCA3Q99758 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCA3Q99758 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ABCA3Q99758 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.51■□□□□ 0.55
ABCA3Q99758 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC18.51■□□□□ 0.55
ABCA3Q99758 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ABCA3Q99758 AL590824.1-201ENST00000403828 1349 ntBASIC18.51■□□□□ 0.55
ABCA3Q99758 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms