Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 AC092910.2-201ENST00000491262 348 ntBASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 LINC00552-201ENST00000625151 2579 ntBASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 SHMT1P1-201ENST00000419974 1312 ntBASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 BOLA3P2-201ENST00000586496 323 ntBASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 AC112220.4-201ENST00000604982 1263 ntBASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 RN7SL767P-201ENST00000493013 295 ntBASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 CLPP-205ENST00000596605 646 ntTSL 2 BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 GGNBP1-204ENST00000613113 887 ntBASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 AC004923.3-201ENST00000527532 355 ntBASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 AC079331.1-201ENST00000623200 1200 ntBASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSMD1Q96PZ7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 AC120498.7-201ENST00000562876 330 ntBASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 AC103702.1-201ENST00000548801 2630 ntBASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms