Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 OR8T1P-201ENST00000421347 918 ntBASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 RPL18AP8-201ENST00000486071 528 ntBASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 AL157792.1-201ENST00000488281 530 ntBASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 BNIP3P41-202ENST00000616656 861 ntBASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS3Q8IXF0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 AL357563.1-201ENST00000404728 395 ntBASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 ERP29P1-201ENST00000442902 706 ntBASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 RNA5SP417-201ENST00000516459 108 ntBASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 ALG1L13P-202ENST00000519320 584 ntBASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 HERC2P11-201ENST00000562845 725 ntBASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 AC100756.2-201ENST00000569537 736 ntBASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 AP000322.3-201ENST00000608665 388 ntBASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 AC090386.2-201ENST00000623010 1039 ntBASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 AC009145.4-201ENST00000625119 1294 ntBASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 PAX6-247ENST00000638965 979 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS3Q8IXF0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS3Q8IXF0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS3Q8IXF0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS3Q8IXF0 BRD7P5-201ENST00000299197 1822 ntBASIC14.96□□□□□ -0.01
NPAS3Q8IXF0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS3Q8IXF0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.96□□□□□ -0.01
NPAS3Q8IXF0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS3Q8IXF0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.96□□□□□ -0.01
NPAS3Q8IXF0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.96□□□□□ -0.01
NPAS3Q8IXF0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS3Q8IXF0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NPAS3Q8IXF0 TCAF2P1-201ENST00000291129 2421 ntBASIC14.96□□□□□ -0.01
NPAS3Q8IXF0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS3Q8IXF0 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS3Q8IXF0 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms