Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 AC124068.2-201ENST00000569473 1109 ntBASIC16.21■□□□□ 0.19
TRIM50Q86XT4 MIR3147-201ENST00000577811 66 ntBASIC16.21■□□□□ 0.19
TRIM50Q86XT4 MIR3188-201ENST00000583494 85 ntBASIC16.21■□□□□ 0.19
TRIM50Q86XT4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 LINC01783-202ENST00000614408 828 ntBASIC16.21■□□□□ 0.19
TRIM50Q86XT4 BX284668.2-205ENST00000619677 828 ntBASIC16.21■□□□□ 0.19
TRIM50Q86XT4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM50Q86XT4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM50Q86XT4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM50Q86XT4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM50Q86XT4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.21■□□□□ 0.18
TRIM50Q86XT4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM50Q86XT4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.21■□□□□ 0.18
TRIM50Q86XT4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM50Q86XT4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 AL354702.1-201ENST00000442006 1960 ntBASIC16.2■□□□□ 0.18
TRIM50Q86XT4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 AL627231.1-201ENST00000394467 1125 ntBASIC16.2■□□□□ 0.18
TRIM50Q86XT4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 ST13P19-201ENST00000442505 1124 ntBASIC16.2■□□□□ 0.18
TRIM50Q86XT4 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 AC103691.2-201ENST00000618824 433 ntBASIC16.2■□□□□ 0.18
TRIM50Q86XT4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 AL805961.1-201ENST00000642026 753 ntBASIC16.2■□□□□ 0.18
TRIM50Q86XT4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
TRIM50Q86XT4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 OR2I1P-210ENST00000642037 4691 ntBASIC16.19■□□□□ 0.18
TRIM50Q86XT4 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 AL583805.1-201ENST00000391389 531 ntBASIC16.19■□□□□ 0.18
TRIM50Q86XT4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms