Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 AP005264.5-201ENST00000590066 467 ntBASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 AC012073.1-201ENST00000606114 1108 ntBASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 AL359091.4-201ENST00000610052 409 ntBASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 LINC00528-201ENST00000600723 2160 ntBASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 OR51A9P-201ENST00000422578 911 ntBASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 AC010632.2-201ENST00000588369 1224 ntBASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 AC006483.2-201ENST00000609813 515 ntBASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD4Q5XG99 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms