Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 LINC01815-202ENST00000641468 1409 ntBASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 KRT18P66-201ENST00000452970 1269 ntBASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 AC018463.1-201ENST00000456674 917 ntBASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHROOM1Q2M3G4 AC006372.4-201ENST00000624122 1543 ntBASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 GUSBP10-201ENST00000417412 665 ntBASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 AC114501.1-201ENST00000445949 172 ntBASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 AC104506.1-201ENST00000609247 429 ntBASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 AC087392.5-201ENST00000612517 489 ntBASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 AC105137.3-201ENST00000617588 984 ntBASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.8■□□□□ 0.28
SHROOM1Q2M3G4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 INTS4P1-203ENST00000641008 3683 ntBASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 AC064801.2-201ENST00000625052 1303 ntBASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 HLA-C-210ENST00000640219 976 ntBASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 AC015656.1-201ENST00000624209 3578 ntBASIC16.79■□□□□ 0.28
SHROOM1Q2M3G4 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms