Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 MIR5572-201ENST00000583188 137 ntBASIC17.42■□□□□ 0.38
RFX7Q2KHR2 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 AC007718.1-201ENST00000621078 280 ntBASIC17.42■□□□□ 0.38
RFX7Q2KHR2 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 CICP16-201ENST00000502609 2813 ntBASIC17.42■□□□□ 0.38
RFX7Q2KHR2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 RNA5SP359-201ENST00000364838 113 ntBASIC17.41■□□□□ 0.38
RFX7Q2KHR2 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 AC073352.2-201ENST00000609385 439 ntBASIC17.41■□□□□ 0.38
RFX7Q2KHR2 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 AC011474.4-201ENST00000623523 2076 ntBASIC17.41■□□□□ 0.38
RFX7Q2KHR2 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 CCT8L1P-201ENST00000465400 1674 ntBASIC17.41■□□□□ 0.38
RFX7Q2KHR2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX7Q2KHR2 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 POU5F1P2-201ENST00000521750 823 ntBASIC17.4■□□□□ 0.38
RFX7Q2KHR2 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 BAP1-211ENST00000615113 489 ntBASIC17.4■□□□□ 0.38
RFX7Q2KHR2 AC103691.2-201ENST00000618824 433 ntBASIC17.4■□□□□ 0.38
RFX7Q2KHR2 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms