Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC10.86□□□□□ -0.67
CMC4P56277 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 AC020914.3-201ENST00000594712 304 ntBASIC10.86□□□□□ -0.67
CMC4P56277 AL118558.3-201ENST00000607414 1079 ntBASIC10.86□□□□□ -0.67
CMC4P56277 AC090164.2-201ENST00000611487 516 ntBASIC10.86□□□□□ -0.67
CMC4P56277 AC005695.3-201ENST00000614522 232 ntBASIC10.86□□□□□ -0.67
CMC4P56277 MIR6869-201ENST00000619434 62 ntBASIC10.86□□□□□ -0.67
CMC4P56277 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC10.86□□□□□ -0.67
CMC4P56277 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC10.86□□□□□ -0.67
CMC4P56277 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 AC232323.1-201ENST00000540724 2099 ntBASIC10.86□□□□□ -0.67
CMC4P56277 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC10.86□□□□□ -0.67
CMC4P56277 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CMC4P56277 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 AC144522.1-201ENST00000625111 1658 ntBASIC10.85□□□□□ -0.67
CMC4P56277 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CMC4P56277 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC10.85□□□□□ -0.67
CMC4P56277 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CMC4P56277 AC011270.2-201ENST00000624293 2550 ntBASIC10.85□□□□□ -0.67
CMC4P56277 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CMC4P56277 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
CMC4P56277 USP35-204ENST00000530267 2419 ntTSL 2 BASIC10.85□□□□□ -0.67
CMC4P56277 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC10.85□□□□□ -0.67
CMC4P56277 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC10.85□□□□□ -0.67
CMC4P56277 FAM45BP-202ENST00000592932 1624 ntBASIC10.85□□□□□ -0.67
CMC4P56277 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CMC4P56277 AC092123.2-201ENST00000611189 5421 ntBASIC10.85□□□□□ -0.67
CMC4P56277 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CMC4P56277 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CMC4P56277 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 AC004899.1-201ENST00000424687 1714 ntBASIC10.85□□□□□ -0.67
CMC4P56277 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC10.85□□□□□ -0.67
CMC4P56277 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
CMC4P56277 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
CMC4P56277 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC10.85□□□□□ -0.67
CMC4P56277 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC10.85□□□□□ -0.67
CMC4P56277 AL645933.1-201ENST00000440087 609 ntBASIC10.85□□□□□ -0.67
CMC4P56277 EIF4HP1-201ENST00000453115 687 ntBASIC10.85□□□□□ -0.67
CMC4P56277 RNMTL1P1-201ENST00000454103 560 ntBASIC10.85□□□□□ -0.67
CMC4P56277 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC10.85□□□□□ -0.67
CMC4P56277 OARD1-204ENST00000464633 717 ntTSL 2 BASIC10.85□□□□□ -0.67
CMC4P56277 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC10.85□□□□□ -0.67
CMC4P56277 RPL18P13-201ENST00000478088 569 ntBASIC10.85□□□□□ -0.67
CMC4P56277 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC10.85□□□□□ -0.67
CMC4P56277 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC10.85□□□□□ -0.67
CMC4P56277 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC10.85□□□□□ -0.67
CMC4P56277 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC10.85□□□□□ -0.67
CMC4P56277 EID1-202ENST00000560490 584 ntTSL 3 BASIC10.85□□□□□ -0.67
CMC4P56277 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC10.85□□□□□ -0.67
CMC4P56277 AC013355.1-201ENST00000562625 723 ntBASIC10.85□□□□□ -0.67
CMC4P56277 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC10.85□□□□□ -0.67
CMC4P56277 AC124068.2-201ENST00000569473 1109 ntBASIC10.85□□□□□ -0.67
CMC4P56277 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC10.85□□□□□ -0.67
CMC4P56277 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC10.85□□□□□ -0.67
CMC4P56277 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC10.85□□□□□ -0.67
CMC4P56277 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC10.85□□□□□ -0.67
CMC4P56277 AC138649.2-201ENST00000615886 705 ntBASIC10.85□□□□□ -0.67
CMC4P56277 ABBA01031663.1-201ENST00000635630 790 ntBASIC10.85□□□□□ -0.67
CMC4P56277 Z98259.2-201ENST00000641583 609 ntBASIC10.85□□□□□ -0.67
CMC4P56277 AC090505.1-201ENST00000430515 1834 ntBASIC10.85□□□□□ -0.67
CMC4P56277 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
CMC4P56277 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC10.85□□□□□ -0.67
CMC4P56277 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CMC4P56277 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
CMC4P56277 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CMC4P56277 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms