Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.65■□□□□ 0.1
VCPP55072 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.65■□□□□ 0.1
VCPP55072 AC020922.3-201ENST00000595064 547 ntBASIC15.65■□□□□ 0.1
VCPP55072 AC012044.1-201ENST00000603431 297 ntBASIC15.65■□□□□ 0.1
VCPP55072 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 AC087045.2-201ENST00000606279 1003 ntBASIC15.65■□□□□ 0.1
VCPP55072 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
VCPP55072 AC103691.2-201ENST00000618824 433 ntBASIC15.65■□□□□ 0.1
VCPP55072 AC022748.3-201ENST00000621828 275 ntBASIC15.65■□□□□ 0.1
VCPP55072 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VCPP55072 AL805961.1-201ENST00000642026 753 ntBASIC15.65■□□□□ 0.1
VCPP55072 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
VCPP55072 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VCPP55072 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
VCPP55072 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
VCPP55072 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
VCPP55072 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
VCPP55072 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.65■□□□□ 0.1
VCPP55072 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
VCPP55072 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
VCPP55072 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
VCPP55072 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.65■□□□□ 0.1
VCPP55072 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.65■□□□□ 0.1
VCPP55072 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
VCPP55072 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
VCPP55072 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
VCPP55072 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.64■□□□□ 0.1
VCPP55072 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.1
VCPP55072 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.64■□□□□ 0.09
VCPP55072 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.64■□□□□ 0.09
VCPP55072 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
VCPP55072 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.64■□□□□ 0.09
VCPP55072 AC026316.1-201ENST00000398900 414 ntBASIC15.64■□□□□ 0.09
VCPP55072 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.64■□□□□ 0.09
VCPP55072 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.64■□□□□ 0.09
VCPP55072 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.64■□□□□ 0.09
VCPP55072 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.64■□□□□ 0.09
VCPP55072 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
VCPP55072 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.64■□□□□ 0.09
VCPP55072 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 AC103988.2-201ENST00000561804 725 ntBASIC15.64■□□□□ 0.09
VCPP55072 AC013355.1-201ENST00000562625 723 ntBASIC15.64■□□□□ 0.09
VCPP55072 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.64■□□□□ 0.09
VCPP55072 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
VCPP55072 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 AC027601.5-201ENST00000624065 2482 ntBASIC15.64■□□□□ 0.09
VCPP55072 AC117489.1-201ENST00000625169 3217 ntBASIC15.64■□□□□ 0.09
VCPP55072 CASP16P-204ENST00000635032 809 ntBASIC15.64■□□□□ 0.09
VCPP55072 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VCPP55072 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.64■□□□□ 0.09
VCPP55072 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.64■□□□□ 0.09
VCPP55072 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.64■□□□□ 0.09
VCPP55072 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.64■□□□□ 0.09
VCPP55072 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VCPP55072 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
VCPP55072 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VCPP55072 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VCPP55072 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.63■□□□□ 0.09
VCPP55072 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VCPP55072 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VCPP55072 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VCPP55072 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
VCPP55072 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VCPP55072 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VCPP55072 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VCPP55072 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VCPP55072 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms