Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.93□□□□□ -0.18
NR1H2P55055 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
NR1H2P55055 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 AC012617.1-204ENST00000586340 2305 ntBASIC13.93□□□□□ -0.18
NR1H2P55055 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.93□□□□□ -0.18
NR1H2P55055 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.93□□□□□ -0.18
NR1H2P55055 AL365181.3-201ENST00000605886 3222 ntBASIC13.93□□□□□ -0.18
NR1H2P55055 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NR1H2P55055 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NR1H2P55055 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.93□□□□□ -0.18
NR1H2P55055 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NR1H2P55055 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.93□□□□□ -0.18
NR1H2P55055 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H2P55055 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.92□□□□□ -0.18
NR1H2P55055 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H2P55055 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.92□□□□□ -0.18
NR1H2P55055 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NR1H2P55055 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H2P55055 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H2P55055 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
NR1H2P55055 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H2P55055 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H2P55055 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H2P55055 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.92□□□□□ -0.18
NR1H2P55055 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H2P55055 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NR1H2P55055 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
NR1H2P55055 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NR1H2P55055 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H2P55055 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NR1H2P55055 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.92□□□□□ -0.18
NR1H2P55055 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H2P55055 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H2P55055 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.92□□□□□ -0.18
NR1H2P55055 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.92□□□□□ -0.18
NR1H2P55055 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
NR1H2P55055 GNAQP1-201ENST00000444815 1067 ntBASIC13.92□□□□□ -0.18
NR1H2P55055 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.92□□□□□ -0.18
NR1H2P55055 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NR1H2P55055 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NR1H2P55055 TIMM17BP1-201ENST00000545713 516 ntBASIC13.92□□□□□ -0.18
NR1H2P55055 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.92□□□□□ -0.18
NR1H2P55055 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.92□□□□□ -0.18
NR1H2P55055 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.92□□□□□ -0.18
NR1H2P55055 SRD5A3P1-201ENST00000603021 949 ntBASIC13.92□□□□□ -0.18
NR1H2P55055 AC099568.2-201ENST00000609194 695 ntBASIC13.92□□□□□ -0.18
NR1H2P55055 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H2P55055 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
NR1H2P55055 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H2P55055 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NR1H2P55055 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.92□□□□□ -0.18
NR1H2P55055 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H2P55055 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NR1H2P55055 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NR1H2P55055 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.92□□□□□ -0.18
NR1H2P55055 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.92□□□□□ -0.18
NR1H2P55055 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.92□□□□□ -0.18
NR1H2P55055 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H2P55055 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H2P55055 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NR1H2P55055 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.92□□□□□ -0.18
NR1H2P55055 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NR1H2P55055 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.91□□□□□ -0.18
NR1H2P55055 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NR1H2P55055 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.91□□□□□ -0.18
NR1H2P55055 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NR1H2P55055 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 KRT8P37-201ENST00000451609 1420 ntBASIC13.91□□□□□ -0.18
NR1H2P55055 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.91□□□□□ -0.18
NR1H2P55055 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms