Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNNI2P48788 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.21■□□□□ 0.35
TNNI2P48788 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.21■□□□□ 0.35
TNNI2P48788 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TNNI2P48788 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TNNI2P48788 MIR600HG-201ENST00000449175 5984 ntBASIC17.21■□□□□ 0.35
TNNI2P48788 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNNI2P48788 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.21■□□□□ 0.35
TNNI2P48788 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNNI2P48788 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNNI2P48788 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TNNI2P48788 AC090502.4-201ENST00000551714 1386 ntBASIC17.21■□□□□ 0.35
TNNI2P48788 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.21■□□□□ 0.35
TNNI2P48788 AL157792.1-201ENST00000488281 530 ntBASIC17.21■□□□□ 0.35
TNNI2P48788 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.21■□□□□ 0.35
TNNI2P48788 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.21■□□□□ 0.35
TNNI2P48788 AC140658.4-201ENST00000561990 352 ntBASIC17.21■□□□□ 0.35
TNNI2P48788 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.21■□□□□ 0.35
TNNI2P48788 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.21■□□□□ 0.35
TNNI2P48788 AC105137.3-201ENST00000617588 984 ntBASIC17.21■□□□□ 0.35
TNNI2P48788 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNNI2P48788 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.21■□□□□ 0.35
TNNI2P48788 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.21■□□□□ 0.35
TNNI2P48788 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNNI2P48788 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.21■□□□□ 0.35
TNNI2P48788 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.21■□□□□ 0.35
TNNI2P48788 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.21■□□□□ 0.35
TNNI2P48788 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TNNI2P48788 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNNI2P48788 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.21■□□□□ 0.34
TNNI2P48788 AJ011931.1-201ENST00000618749 2492 ntBASIC17.21■□□□□ 0.34
TNNI2P48788 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
TNNI2P48788 LINC01815-202ENST00000641468 1409 ntBASIC17.21■□□□□ 0.34
TNNI2P48788 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TNNI2P48788 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TNNI2P48788 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TNNI2P48788 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TNNI2P48788 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.21■□□□□ 0.34
TNNI2P48788 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.2■□□□□ 0.34
TNNI2P48788 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNNI2P48788 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNNI2P48788 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.2■□□□□ 0.34
TNNI2P48788 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNNI2P48788 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TNNI2P48788 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.2■□□□□ 0.34
TNNI2P48788 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.2■□□□□ 0.34
TNNI2P48788 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNNI2P48788 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNNI2P48788 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNNI2P48788 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TNNI2P48788 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNNI2P48788 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNNI2P48788 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNNI2P48788 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TNNI2P48788 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.2■□□□□ 0.34
TNNI2P48788 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.2■□□□□ 0.34
TNNI2P48788 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.2■□□□□ 0.34
TNNI2P48788 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNNI2P48788 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC17.2■□□□□ 0.34
TNNI2P48788 AP000911.2-201ENST00000534330 502 ntBASIC17.2■□□□□ 0.34
TNNI2P48788 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.2■□□□□ 0.34
TNNI2P48788 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC17.2■□□□□ 0.34
TNNI2P48788 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TNNI2P48788 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNNI2P48788 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.2■□□□□ 0.34
TNNI2P48788 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNNI2P48788 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNNI2P48788 AC015688.4-201ENST00000580780 1647 ntBASIC17.2■□□□□ 0.34
TNNI2P48788 AC006504.5-208ENST00000588784 2401 ntBASIC17.2■□□□□ 0.34
TNNI2P48788 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.2■□□□□ 0.34
TNNI2P48788 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
TNNI2P48788 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.2■□□□□ 0.34
TNNI2P48788 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNNI2P48788 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TNNI2P48788 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC17.2■□□□□ 0.34
TNNI2P48788 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNNI2P48788 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNNI2P48788 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNNI2P48788 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNNI2P48788 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNNI2P48788 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNNI2P48788 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TNNI2P48788 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TNNI2P48788 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.19■□□□□ 0.34
TNNI2P48788 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNNI2P48788 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TNNI2P48788 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNNI2P48788 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNNI2P48788 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNNI2P48788 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNNI2P48788 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TNNI2P48788 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.19■□□□□ 0.34
TNNI2P48788 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNNI2P48788 AL512306.1-201ENST00000432698 848 ntBASIC17.19■□□□□ 0.34
TNNI2P48788 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC17.19■□□□□ 0.34
TNNI2P48788 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.19■□□□□ 0.34
TNNI2P48788 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.19■□□□□ 0.34
TNNI2P48788 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC17.19■□□□□ 0.34
TNNI2P48788 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms