Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
SLC6A4P31645 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC6A4P31645 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 LAP3P2-201ENST00000454686 1454 ntBASIC14.89□□□□□ -0.03
SLC6A4P31645 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
SLC6A4P31645 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SLC6A4P31645 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.88□□□□□ -0.03
SLC6A4P31645 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
SLC6A4P31645 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SLC6A4P31645 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC6A4P31645 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC6A4P31645 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.88□□□□□ -0.03
SLC6A4P31645 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC6A4P31645 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC6A4P31645 AC006335.1-201ENST00000445200 547 ntBASIC14.88□□□□□ -0.03
SLC6A4P31645 UPF3AP2-201ENST00000457924 1132 ntBASIC14.88□□□□□ -0.03
SLC6A4P31645 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.88□□□□□ -0.03
SLC6A4P31645 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SLC6A4P31645 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.88□□□□□ -0.03
SLC6A4P31645 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC6A4P31645 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC6A4P31645 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC6A4P31645 AC090386.2-201ENST00000623010 1039 ntBASIC14.88□□□□□ -0.03
SLC6A4P31645 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC6A4P31645 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
SLC6A4P31645 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC6A4P31645 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.88□□□□□ -0.03
SLC6A4P31645 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
SLC6A4P31645 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SLC6A4P31645 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SLC6A4P31645 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
SLC6A4P31645 FRMPD2B-201ENST00000431305 1347 ntBASIC14.88□□□□□ -0.03
SLC6A4P31645 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A4P31645 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC6A4P31645 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SLC6A4P31645 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC6A4P31645 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SLC6A4P31645 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SLC6A4P31645 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC6A4P31645 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SLC6A4P31645 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC6A4P31645 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC6A4P31645 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 RN7SL720P-201ENST00000488178 304 ntBASIC14.87□□□□□ -0.03
SLC6A4P31645 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC6A4P31645 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.87□□□□□ -0.03
SLC6A4P31645 RHOQP1-201ENST00000555758 579 ntBASIC14.87□□□□□ -0.03
SLC6A4P31645 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 MIR4754-201ENST00000582477 89 ntBASIC14.87□□□□□ -0.03
SLC6A4P31645 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC6A4P31645 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC6A4P31645 AL022334.2-201ENST00000610000 484 ntBASIC14.87□□□□□ -0.03
SLC6A4P31645 AL353770.1-201ENST00000614915 403 ntBASIC14.87□□□□□ -0.03
SLC6A4P31645 AL591471.1-201ENST00000621855 229 ntBASIC14.87□□□□□ -0.03
SLC6A4P31645 AC068587.10-201ENST00000641210 219 ntBASIC14.87□□□□□ -0.03
SLC6A4P31645 BX640514.1-201ENST00000583223 1918 ntBASIC14.87□□□□□ -0.03
SLC6A4P31645 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms