Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL1P22362 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL1P22362 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.51□□□□□ -0.41
CCL1P22362 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 AL157407.1-201ENST00000435784 904 ntBASIC12.51□□□□□ -0.41
CCL1P22362 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.51□□□□□ -0.41
CCL1P22362 ST13P19-201ENST00000442505 1124 ntBASIC12.51□□□□□ -0.41
CCL1P22362 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL1P22362 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.51□□□□□ -0.41
CCL1P22362 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL1P22362 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL1P22362 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL1P22362 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL1P22362 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL1P22362 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CCL1P22362 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL1P22362 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL1P22362 TCAF1P1-201ENST00000414990 2232 ntBASIC12.51□□□□□ -0.41
CCL1P22362 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL1P22362 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 LAP3P2-201ENST00000454686 1454 ntBASIC12.51□□□□□ -0.41
CCL1P22362 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL1P22362 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL1P22362 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CCL1P22362 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
CCL1P22362 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
CCL1P22362 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL1P22362 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL1P22362 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL1P22362 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL1P22362 CNN2P10-201ENST00000443067 918 ntBASIC12.5□□□□□ -0.41
CCL1P22362 KRT18P15-201ENST00000458108 1291 ntBASIC12.5□□□□□ -0.41
CCL1P22362 RN7SL692P-201ENST00000464677 288 ntBASIC12.5□□□□□ -0.41
CCL1P22362 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.5□□□□□ -0.41
CCL1P22362 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CCL1P22362 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL1P22362 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CCL1P22362 DUX4L46-201ENST00000566845 751 ntBASIC12.5□□□□□ -0.41
CCL1P22362 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL1P22362 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms