Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 BEND3P3-201ENST00000611030 2440 ntBASIC12.86□□□□□ -0.35
ATF1P18846 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
ATF1P18846 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
ATF1P18846 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
ATF1P18846 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.85□□□□□ -0.35
ATF1P18846 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.85□□□□□ -0.35
ATF1P18846 AC015688.4-201ENST00000580780 1647 ntBASIC12.85□□□□□ -0.35
ATF1P18846 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ATF1P18846 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ATF1P18846 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
ATF1P18846 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.85□□□□□ -0.35
ATF1P18846 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.85□□□□□ -0.35
ATF1P18846 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.85□□□□□ -0.35
ATF1P18846 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.85□□□□□ -0.35
ATF1P18846 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.85□□□□□ -0.35
ATF1P18846 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.85□□□□□ -0.35
ATF1P18846 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.85□□□□□ -0.35
ATF1P18846 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.85□□□□□ -0.35
ATF1P18846 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.85□□□□□ -0.35
ATF1P18846 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 AC123567.1-201ENST00000548294 1261 ntBASIC12.85□□□□□ -0.35
ATF1P18846 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.85□□□□□ -0.35
ATF1P18846 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.85□□□□□ -0.35
ATF1P18846 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ATF1P18846 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.85□□□□□ -0.35
ATF1P18846 AC133539.2-201ENST00000604757 467 ntBASIC12.85□□□□□ -0.35
ATF1P18846 AP005019.2-201ENST00000615104 511 ntBASIC12.85□□□□□ -0.35
ATF1P18846 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ATF1P18846 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
ATF1P18846 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.85□□□□□ -0.35
ATF1P18846 NCLP1-201ENST00000445357 1963 ntBASIC12.85□□□□□ -0.35
ATF1P18846 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ATF1P18846 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.85□□□□□ -0.35
ATF1P18846 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ATF1P18846 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.85□□□□□ -0.35
ATF1P18846 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.85□□□□□ -0.35
ATF1P18846 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ATF1P18846 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.84□□□□□ -0.35
ATF1P18846 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
ATF1P18846 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
ATF1P18846 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
ATF1P18846 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ATF1P18846 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.84□□□□□ -0.35
ATF1P18846 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.84□□□□□ -0.35
ATF1P18846 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.84□□□□□ -0.35
ATF1P18846 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ATF1P18846 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ATF1P18846 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ATF1P18846 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.84□□□□□ -0.35
ATF1P18846 DFFBP1-201ENST00000433250 979 ntBASIC12.84□□□□□ -0.35
ATF1P18846 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.84□□□□□ -0.35
ATF1P18846 RNA5SP421-201ENST00000516864 134 ntBASIC12.84□□□□□ -0.35
ATF1P18846 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.84□□□□□ -0.35
ATF1P18846 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.84□□□□□ -0.35
ATF1P18846 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.84□□□□□ -0.35
ATF1P18846 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.84□□□□□ -0.35
ATF1P18846 AC009118.2-201ENST00000613275 655 ntBASIC12.84□□□□□ -0.35
ATF1P18846 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.84□□□□□ -0.35
ATF1P18846 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ATF1P18846 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms