Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.98□□□□□ -0.01
ERCC2P18074 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
ERCC2P18074 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.98□□□□□ -0.01
ERCC2P18074 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.98□□□□□ -0.01
ERCC2P18074 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.98□□□□□ -0.01
ERCC2P18074 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.98□□□□□ -0.01
ERCC2P18074 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
ERCC2P18074 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.98□□□□□ -0.01
ERCC2P18074 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.98□□□□□ -0.01
ERCC2P18074 AL591846.1-201ENST00000451736 433 ntBASIC14.98□□□□□ -0.01
ERCC2P18074 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.98□□□□□ -0.01
ERCC2P18074 TUBB8P8-201ENST00000458717 1058 ntBASIC14.98□□□□□ -0.01
ERCC2P18074 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.98□□□□□ -0.01
ERCC2P18074 AC021723.1-201ENST00000486306 515 ntBASIC14.98□□□□□ -0.01
ERCC2P18074 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ERCC2P18074 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.98□□□□□ -0.01
ERCC2P18074 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.98□□□□□ -0.01
ERCC2P18074 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 AL160314.3-201ENST00000556041 767 ntBASIC14.98□□□□□ -0.01
ERCC2P18074 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
ERCC2P18074 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ERCC2P18074 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ERCC2P18074 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.98□□□□□ -0.01
ERCC2P18074 AC067750.1-201ENST00000608826 6545 ntBASIC14.98□□□□□ -0.01
ERCC2P18074 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.98□□□□□ -0.01
ERCC2P18074 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
ERCC2P18074 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.98□□□□□ -0.01
ERCC2P18074 KRT8P29-201ENST00000420409 1371 ntBASIC14.98□□□□□ -0.01
ERCC2P18074 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ERCC2P18074 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.97□□□□□ -0.01
ERCC2P18074 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.97□□□□□ -0.01
ERCC2P18074 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.97□□□□□ -0.01
ERCC2P18074 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 AC144522.1-201ENST00000625111 1658 ntBASIC14.97□□□□□ -0.01
ERCC2P18074 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
ERCC2P18074 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
ERCC2P18074 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.97□□□□□ -0.01
ERCC2P18074 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.97□□□□□ -0.01
ERCC2P18074 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.97□□□□□ -0.01
ERCC2P18074 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 ST13P19-201ENST00000442505 1124 ntBASIC14.97□□□□□ -0.01
ERCC2P18074 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.97□□□□□ -0.01
ERCC2P18074 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 RNMTL1P1-201ENST00000454103 560 ntBASIC14.97□□□□□ -0.01
ERCC2P18074 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.97□□□□□ -0.01
ERCC2P18074 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.97□□□□□ -0.01
ERCC2P18074 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.97□□□□□ -0.01
ERCC2P18074 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.97□□□□□ -0.01
ERCC2P18074 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
ERCC2P18074 AC005695.3-201ENST00000614522 232 ntBASIC14.97□□□□□ -0.01
ERCC2P18074 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
ERCC2P18074 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.97□□□□□ -0.01
ERCC2P18074 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.97□□□□□ -0.01
ERCC2P18074 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.97□□□□□ -0.01
ERCC2P18074 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 AL033527.4-201ENST00000641026 673 ntBASIC14.97□□□□□ -0.01
ERCC2P18074 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
ERCC2P18074 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC2P18074 MBLAC2-202ENST00000514906 1936 ntBASIC14.97□□□□□ -0.01
ERCC2P18074 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC2P18074 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms