Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RPS2P36-201ENST00000456516 831 ntBASIC11.43□□□□□ -0.58
CD28P10747 PFN2-206ENST00000461930 606 ntTSL 4 BASIC11.43□□□□□ -0.58
CD28P10747 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC11.43□□□□□ -0.58
CD28P10747 POU5F1P2-201ENST00000521750 823 ntBASIC11.43□□□□□ -0.58
CD28P10747 CCNC-217ENST00000523985 958 ntTSL 2 BASIC11.43□□□□□ -0.58
CD28P10747 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC11.43□□□□□ -0.58
CD28P10747 RBM8B-201ENST00000555532 525 ntBASIC11.43□□□□□ -0.58
CD28P10747 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC11.43□□□□□ -0.58
CD28P10747 MIR4722-201ENST00000578292 60 ntBASIC11.43□□□□□ -0.58
CD28P10747 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC11.43□□□□□ -0.58
CD28P10747 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC11.43□□□□□ -0.58
CD28P10747 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC11.43□□□□□ -0.58
CD28P10747 CDK7-214ENST00000626796 358 ntTSL 5 BASIC11.43□□□□□ -0.58
CD28P10747 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC11.43□□□□□ -0.58
CD28P10747 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC11.43□□□□□ -0.58
CD28P10747 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
CD28P10747 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
CD28P10747 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC11.43□□□□□ -0.58
CD28P10747 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.43□□□□□ -0.58
CD28P10747 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CD28P10747 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.43□□□□□ -0.58
CD28P10747 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
CD28P10747 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CD28P10747 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
CD28P10747 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC11.43□□□□□ -0.58
CD28P10747 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC11.43□□□□□ -0.58
CD28P10747 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.42□□□□□ -0.58
CD28P10747 AL136172.1-201ENST00000598590 1394 ntBASIC11.42□□□□□ -0.58
CD28P10747 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
CD28P10747 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CD28P10747 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC11.42□□□□□ -0.58
CD28P10747 AC006480.2-201ENST00000609770 1337 ntBASIC11.42□□□□□ -0.58
CD28P10747 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CD28P10747 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
CD28P10747 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
CD28P10747 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CD28P10747 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
CD28P10747 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.42□□□□□ -0.58
CD28P10747 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC11.42□□□□□ -0.58
CD28P10747 CEP164P1-201ENST00000455142 418 ntBASIC11.42□□□□□ -0.58
CD28P10747 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC11.42□□□□□ -0.58
CD28P10747 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC11.42□□□□□ -0.58
CD28P10747 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC11.42□□□□□ -0.58
CD28P10747 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC11.42□□□□□ -0.58
CD28P10747 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC11.42□□□□□ -0.58
CD28P10747 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC11.42□□□□□ -0.58
CD28P10747 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11.42□□□□□ -0.58
CD28P10747 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC11.42□□□□□ -0.58
CD28P10747 AC242376.1-201ENST00000559033 726 ntBASIC11.42□□□□□ -0.58
CD28P10747 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC11.42□□□□□ -0.58
CD28P10747 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC11.42□□□□□ -0.58
CD28P10747 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC11.42□□□□□ -0.58
CD28P10747 AL157813.1-201ENST00000612996 587 ntBASIC11.42□□□□□ -0.58
CD28P10747 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC11.42□□□□□ -0.58
CD28P10747 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.42□□□□□ -0.58
CD28P10747 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.42□□□□□ -0.58
CD28P10747 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
CD28P10747 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.42□□□□□ -0.58
CD28P10747 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC11.42□□□□□ -0.58
CD28P10747 TBC1D3J-201ENST00000620719 1426 ntBASIC11.42□□□□□ -0.58
CD28P10747 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.42□□□□□ -0.58
CD28P10747 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.42□□□□□ -0.58
CD28P10747 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
CD28P10747 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.42□□□□□ -0.58
CD28P10747 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC11.42□□□□□ -0.58
CD28P10747 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms