Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.23■□□□□ 0.03
RB1P06400 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.23■□□□□ 0.03
RB1P06400 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.23■□□□□ 0.03
RB1P06400 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 NORAD-201ENST00000565493 5339 ntBASIC15.23■□□□□ 0.03
RB1P06400 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.23■□□□□ 0.03
RB1P06400 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RB1P06400 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.23■□□□□ 0.03
RB1P06400 VENTXP4-201ENST00000449029 958 ntBASIC15.23■□□□□ 0.03
RB1P06400 AC090136.2-201ENST00000517809 420 ntBASIC15.23■□□□□ 0.03
RB1P06400 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RB1P06400 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.23■□□□□ 0.03
RB1P06400 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC15.23■□□□□ 0.03
RB1P06400 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 THY1-209ENST00000580275 578 ntTSL 3 BASIC15.23■□□□□ 0.03
RB1P06400 CYP4F36P-201ENST00000589193 186 ntBASIC15.23■□□□□ 0.03
RB1P06400 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.23■□□□□ 0.03
RB1P06400 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.23■□□□□ 0.03
RB1P06400 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RB1P06400 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RB1P06400 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RB1P06400 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
RB1P06400 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.23■□□□□ 0.03
RB1P06400 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.22■□□□□ 0.03
RB1P06400 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.22■□□□□ 0.03
RB1P06400 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.22■□□□□ 0.03
RB1P06400 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.22■□□□□ 0.03
RB1P06400 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RB1P06400 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 ACE3P-201ENST00000423435 1973 ntBASIC15.22■□□□□ 0.03
RB1P06400 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RB1P06400 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.22■□□□□ 0.03
RB1P06400 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.22■□□□□ 0.03
RB1P06400 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.22■□□□□ 0.03
RB1P06400 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC15.22■□□□□ 0.03
RB1P06400 AC108734.2-201ENST00000420887 1069 ntBASIC15.22■□□□□ 0.03
RB1P06400 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC15.22■□□□□ 0.03
RB1P06400 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC15.22■□□□□ 0.03
RB1P06400 AC006529.1-201ENST00000459978 637 ntBASIC15.22■□□□□ 0.03
RB1P06400 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC15.22■□□□□ 0.03
RB1P06400 AC063952.3-201ENST00000467756 308 ntBASIC15.22■□□□□ 0.03
RB1P06400 AC026470.1-201ENST00000478038 846 ntBASIC15.22■□□□□ 0.03
RB1P06400 AC095040.1-201ENST00000513286 675 ntBASIC15.22■□□□□ 0.03
RB1P06400 IGHV1-12-201ENST00000518307 205 ntBASIC15.22■□□□□ 0.03
RB1P06400 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RB1P06400 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RB1P06400 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.22■□□□□ 0.03
RB1P06400 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.22■□□□□ 0.03
RB1P06400 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC15.22■□□□□ 0.03
RB1P06400 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.22■□□□□ 0.03
RB1P06400 RPS5-204ENST00000598098 536 ntTSL 2 BASIC15.22■□□□□ 0.03
RB1P06400 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.22■□□□□ 0.03
RB1P06400 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC15.22■□□□□ 0.03
RB1P06400 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
RB1P06400 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.22■□□□□ 0.03
RB1P06400 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.22■□□□□ 0.03
RB1P06400 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
RB1P06400 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RB1P06400 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RB1P06400 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms