Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CHGBP05060 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHGBP05060 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.39■□□□□ 0.38
CHGBP05060 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CHGBP05060 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHGBP05060 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHGBP05060 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CHGBP05060 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHGBP05060 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHGBP05060 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHGBP05060 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.39■□□□□ 0.37
CHGBP05060 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.39■□□□□ 0.37
CHGBP05060 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.39■□□□□ 0.37
CHGBP05060 AC024681.1-201ENST00000521917 487 ntBASIC17.39■□□□□ 0.37
CHGBP05060 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.39■□□□□ 0.37
CHGBP05060 AC091544.8-201ENST00000619490 361 ntBASIC17.39■□□□□ 0.37
CHGBP05060 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.39■□□□□ 0.37
CHGBP05060 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHGBP05060 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHGBP05060 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CHGBP05060 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHGBP05060 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.39■□□□□ 0.37
CHGBP05060 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHGBP05060 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHGBP05060 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHGBP05060 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.39■□□□□ 0.37
CHGBP05060 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.39■□□□□ 0.37
CHGBP05060 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHGBP05060 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC17.38■□□□□ 0.37
CHGBP05060 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHGBP05060 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.38■□□□□ 0.37
CHGBP05060 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHGBP05060 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CHGBP05060 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHGBP05060 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHGBP05060 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHGBP05060 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHGBP05060 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHGBP05060 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHGBP05060 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHGBP05060 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHGBP05060 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CHGBP05060 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CHGBP05060 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.38■□□□□ 0.37
CHGBP05060 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.38■□□□□ 0.37
CHGBP05060 PDIA3P2-201ENST00000428073 158 ntBASIC17.38■□□□□ 0.37
CHGBP05060 AC011742.3-201ENST00000439053 820 ntBASIC17.38■□□□□ 0.37
CHGBP05060 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.38■□□□□ 0.37
CHGBP05060 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.38■□□□□ 0.37
CHGBP05060 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.38■□□□□ 0.37
CHGBP05060 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.38■□□□□ 0.37
CHGBP05060 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.38■□□□□ 0.37
CHGBP05060 AL136295.7-201ENST00000619226 1200 ntBASIC17.38■□□□□ 0.37
CHGBP05060 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHGBP05060 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHGBP05060 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHGBP05060 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHGBP05060 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHGBP05060 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.38■□□□□ 0.37
CHGBP05060 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.38■□□□□ 0.37
CHGBP05060 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHGBP05060 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.38■□□□□ 0.37
CHGBP05060 AL365181.3-201ENST00000605886 3222 ntBASIC17.38■□□□□ 0.37
CHGBP05060 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHGBP05060 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CHGBP05060 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC17.37■□□□□ 0.37
CHGBP05060 AL157996.1-201ENST00000624684 2299 ntBASIC17.37■□□□□ 0.37
CHGBP05060 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CHGBP05060 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.37■□□□□ 0.37
CHGBP05060 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CHGBP05060 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CHGBP05060 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 AC111170.3-201ENST00000624282 2464 ntBASIC17.37■□□□□ 0.37
CHGBP05060 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.37■□□□□ 0.37
CHGBP05060 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.37■□□□□ 0.37
CHGBP05060 RN7SL277P-201ENST00000481521 288 ntBASIC17.37■□□□□ 0.37
CHGBP05060 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.37■□□□□ 0.37
CHGBP05060 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.37■□□□□ 0.37
CHGBP05060 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.37■□□□□ 0.37
CHGBP05060 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.37■□□□□ 0.37
CHGBP05060 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.37■□□□□ 0.37
CHGBP05060 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.37■□□□□ 0.37
CHGBP05060 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.37■□□□□ 0.37
CHGBP05060 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.37■□□□□ 0.37
CHGBP05060 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.37■□□□□ 0.37
CHGBP05060 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 PKD1P5-201ENST00000532415 10291 ntBASIC17.37■□□□□ 0.37
CHGBP05060 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms