Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DDX49Q9Y6V7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX49Q9Y6V7 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX49Q9Y6V7 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX49Q9Y6V7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DDX49Q9Y6V7 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DDX49Q9Y6V7 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DDX49Q9Y6V7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.64■□□□□ 0.41
DDX49Q9Y6V7 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC17.64■□□□□ 0.41
DDX49Q9Y6V7 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX49Q9Y6V7 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 AL133267.1-201ENST00000398220 340 ntBASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 BRWD1P1-201ENST00000401091 371 ntBASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 AL355994.2-201ENST00000447882 704 ntBASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 AL606495.2-201ENST00000605867 535 ntBASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 AC027612.1-201ENST00000445234 2395 ntBASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
DDX49Q9Y6V7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 AC104457.1-201ENST00000401024 814 ntBASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 RNA5SP412-201ENST00000516234 123 ntBASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 FAM8A2P-201ENST00000528813 1142 ntBASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 AC078819.1-201ENST00000547454 765 ntBASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 AC012085.1-201ENST00000548270 765 ntBASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 AC145423.3-201ENST00000615987 467 ntBASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 LILRP1-201ENST00000444199 1370 ntBASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms