Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC098614.1-201ENST00000368528 745 ntBASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 TLE1P1-201ENST00000422965 589 ntBASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 AC068587.3-201ENST00000526613 355 ntBASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 AC027307.3-201ENST00000594262 1100 ntBASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 AC025048.6-201ENST00000634326 1161 ntBASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RHBDD3Q9Y3P4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.83□□□□□ -0.35
RHBDD3Q9Y3P4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.83□□□□□ -0.35
RHBDD3Q9Y3P4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.83□□□□□ -0.35
RHBDD3Q9Y3P4 TCAM1P-207ENST00000485295 1537 ntBASIC12.83□□□□□ -0.35
RHBDD3Q9Y3P4 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 AC079781.5-202ENST00000641784 3743 ntBASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms