Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 HSPA8P5-201ENST00000456928 2069 ntBASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 NUTM2HP-201ENST00000442076 2498 ntBASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 GAPDHP40-201ENST00000505218 1006 ntBASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 BX640515.1-201ENST00000617215 977 ntBASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 AC020658.7-201ENST00000624274 2442 ntBASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP3Q9Y2W7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
KCNIP3Q9Y2W7 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.27□□□□□ -0.44
KCNIP3Q9Y2W7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
KCNIP3Q9Y2W7 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
KCNIP3Q9Y2W7 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.44
KCNIP3Q9Y2W7 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
KCNIP3Q9Y2W7 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
KCNIP3Q9Y2W7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
KCNIP3Q9Y2W7 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
KCNIP3Q9Y2W7 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
KCNIP3Q9Y2W7 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
KCNIP3Q9Y2W7 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
KCNIP3Q9Y2W7 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.27□□□□□ -0.44
KCNIP3Q9Y2W7 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
KCNIP3Q9Y2W7 RPL37AP1-201ENST00000412502 279 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms