Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 AKR1C6P-201ENST00000432950 983 ntBASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 GARS-210ENST00000627489 324 ntTSL 4 BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 AC010997.1-201ENST00000447646 350 ntBASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 OR2A15P-201ENST00000463814 900 ntBASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
RIMBP3Q9UFD9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 RNA5SP84-201ENST00000364740 107 ntBASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 AC138781.1-201ENST00000501322 505 ntTSL 3 BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 AC090825.2-201ENST00000557959 739 ntBASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 SORD2P-201ENST00000558556 1069 ntBASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 AC020909.3-201ENST00000598194 375 ntTSL 3 BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 AC245884.8-201ENST00000599382 880 ntBASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 SNORA50D-202ENST00000627561 132 ntBASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RIMBP3Q9UFD9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 FATE1-201ENST00000370350 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 PGAM1P10-201ENST00000402426 761 ntBASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 NME6-211ENST00000447314 621 ntTSL 3 BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 TCP10L-202ENST00000472557 732 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 AC011456.1-201ENST00000592270 536 ntTSL 4 BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms