Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 AC015688.4-201ENST00000580780 1647 ntBASIC13.41□□□□□ -0.26
LRFN1Q9P244 KRT8P19-201ENST00000551916 1455 ntBASIC13.41□□□□□ -0.26
LRFN1Q9P244 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 AC006504.5-208ENST00000588784 2401 ntBASIC13.4□□□□□ -0.26
LRFN1Q9P244 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 AC018529.2-202ENST00000611482 3087 ntBASIC13.4□□□□□ -0.26
LRFN1Q9P244 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.4□□□□□ -0.26
LRFN1Q9P244 AC239868.1-201ENST00000369385 493 ntBASIC13.4□□□□□ -0.26
LRFN1Q9P244 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 AC134698.3-201ENST00000523880 214 ntBASIC13.4□□□□□ -0.26
LRFN1Q9P244 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 AC020922.3-201ENST00000595064 547 ntBASIC13.4□□□□□ -0.26
LRFN1Q9P244 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 AL157813.1-201ENST00000612996 587 ntBASIC13.4□□□□□ -0.26
LRFN1Q9P244 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.4□□□□□ -0.26
LRFN1Q9P244 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRFN1Q9P244 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
LRFN1Q9P244 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
LRFN1Q9P244 AL009178.2-201ENST00000597278 2719 ntBASIC13.4□□□□□ -0.27
LRFN1Q9P244 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.27
LRFN1Q9P244 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRFN1Q9P244 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.39□□□□□ -0.27
LRFN1Q9P244 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms