Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 AC104457.1-201ENST00000401024 814 ntBASIC12.53□□□□□ -0.4
COMMD9Q9P000 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 AL080243.2-201ENST00000418783 582 ntBASIC12.53□□□□□ -0.4
COMMD9Q9P000 AC015922.1-201ENST00000421102 1152 ntBASIC12.53□□□□□ -0.4
COMMD9Q9P000 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 AC023141.5-201ENST00000458585 616 ntBASIC12.53□□□□□ -0.4
COMMD9Q9P000 KRT18P43-201ENST00000469825 1281 ntBASIC12.53□□□□□ -0.4
COMMD9Q9P000 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 AL589739.1-201ENST00000607720 493 ntBASIC12.53□□□□□ -0.4
COMMD9Q9P000 AP001059.3-201ENST00000619053 235 ntBASIC12.53□□□□□ -0.4
COMMD9Q9P000 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.53□□□□□ -0.4
COMMD9Q9P000 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 AL023775.1-201ENST00000454907 1746 ntBASIC12.53□□□□□ -0.4
COMMD9Q9P000 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COMMD9Q9P000 AC020910.6-201ENST00000623084 1459 ntBASIC12.53□□□□□ -0.4
COMMD9Q9P000 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
COMMD9Q9P000 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COMMD9Q9P000 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
COMMD9Q9P000 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
COMMD9Q9P000 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COMMD9Q9P000 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.52□□□□□ -0.4
COMMD9Q9P000 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.52□□□□□ -0.4
COMMD9Q9P000 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.52□□□□□ -0.4
COMMD9Q9P000 AC111170.3-201ENST00000624282 2464 ntBASIC12.52□□□□□ -0.4
COMMD9Q9P000 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
COMMD9Q9P000 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COMMD9Q9P000 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.52□□□□□ -0.4
COMMD9Q9P000 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.52□□□□□ -0.4
COMMD9Q9P000 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
COMMD9Q9P000 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
COMMD9Q9P000 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COMMD9Q9P000 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
COMMD9Q9P000 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COMMD9Q9P000 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
COMMD9Q9P000 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.52□□□□□ -0.4
COMMD9Q9P000 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 CES1P1-201ENST00000421606 1704 ntBASIC12.52□□□□□ -0.41
COMMD9Q9P000 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 AC025048.3-201ENST00000590609 569 ntBASIC12.52□□□□□ -0.41
COMMD9Q9P000 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 AC005702.4-201ENST00000618393 416 ntBASIC12.52□□□□□ -0.41
COMMD9Q9P000 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 AL033527.5-202ENST00000641632 1098 ntBASIC12.52□□□□□ -0.41
COMMD9Q9P000 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms