Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 GCSHP3-201ENST00000431120 391 ntBASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 PSMD4P1-201ENST00000433951 1109 ntBASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 RPL35P9-201ENST00000446059 350 ntBASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 AC021305.1-201ENST00000520656 1514 ntBASIC15.84■□□□□ 0.13
TRMT13Q9NUP7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.83■□□□□ 0.13
TRMT13Q9NUP7 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRMT13Q9NUP7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
TRMT13Q9NUP7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRMT13Q9NUP7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.83■□□□□ 0.13
TRMT13Q9NUP7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 NHP2-202ENST00000314397 599 ntTSL 2 BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 PPIA-208ENST00000489459 907 ntTSL 2 BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 PGAM1P12-201ENST00000505622 748 ntBASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 RNA5SP406-201ENST00000516106 112 ntBASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 AL133467.4-201ENST00000602953 725 ntBASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 PPIA-210ENST00000620047 827 ntTSL 5 BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 AC002472.4-201ENST00000641915 272 ntBASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 AC067931.2-201ENST00000623655 2003 ntBASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 LAP3P2-201ENST00000454686 1454 ntBASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRMT13Q9NUP7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 AQP7P5-201ENST00000428759 1049 ntBASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 AQP7P4-201ENST00000447083 1042 ntBASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 AQP7P2-201ENST00000453967 1041 ntBASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 AGPAT5P1-201ENST00000455855 1019 ntBASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 AC226150.1-201ENST00000544259 466 ntBASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.82■□□□□ 0.12
TRMT13Q9NUP7 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms