Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 LRRC59-203ENST00000576448 1531 ntBASIC17.98■□□□□ 0.47
UPF2Q9HAU5 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 RN7SL399P-201ENST00000471648 279 ntBASIC17.98■□□□□ 0.47
UPF2Q9HAU5 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 AL662799.1-202ENST00000614205 422 ntBASIC17.98■□□□□ 0.47
UPF2Q9HAU5 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 PTPRVP-205ENST00000641549 5067 ntBASIC17.98■□□□□ 0.47
UPF2Q9HAU5 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.98■□□□□ 0.47
UPF2Q9HAU5 TUBB8P4-201ENST00000511806 1324 ntBASIC17.98■□□□□ 0.47
UPF2Q9HAU5 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 REXO1L1P-201ENST00000379010 6598 ntBASIC17.97■□□□□ 0.47
UPF2Q9HAU5 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 AGAP10P-201ENST00000454844 2418 ntBASIC17.97■□□□□ 0.47
UPF2Q9HAU5 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 TSEN15P1-201ENST00000423257 515 ntBASIC17.97■□□□□ 0.47
UPF2Q9HAU5 AP006288.1-201ENST00000446065 395 ntBASIC17.97■□□□□ 0.47
UPF2Q9HAU5 AL589987.1-201ENST00000453380 819 ntBASIC17.97■□□□□ 0.47
UPF2Q9HAU5 AC067863.1-201ENST00000494933 530 ntBASIC17.97■□□□□ 0.47
UPF2Q9HAU5 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 AL671883.3-201ENST00000603274 991 ntBASIC17.97■□□□□ 0.47
UPF2Q9HAU5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 AL590560.3-201ENST00000623350 461 ntBASIC17.97■□□□□ 0.47
UPF2Q9HAU5 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms