Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 ELK1P1-201ENST00000485699 580 ntBASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 AC104596.2-201ENST00000512793 793 ntBASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 AC131206.1-201ENST00000538078 1211 ntBASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 AC092552.1-201ENST00000547243 906 ntBASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 AL157996.1-201ENST00000624684 2299 ntBASIC13.71□□□□□ -0.21
AMBRA1Q9C0C7 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 CU639417.3-201ENST00000624240 1404 ntBASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
AMBRA1Q9C0C7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 DGCR5-201ENST00000399539 862 ntBASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 AL359711.2-201ENST00000563105 872 ntBASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 AL365181.3-201ENST00000605886 3222 ntBASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms