Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
VRK1Q99986 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.02□□□□□ -0.33
VRK1Q99986 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.02□□□□□ -0.33
VRK1Q99986 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.02□□□□□ -0.33
VRK1Q99986 ACTBP8-201ENST00000403258 1108 ntBASIC13.02□□□□□ -0.33
VRK1Q99986 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.02□□□□□ -0.33
VRK1Q99986 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.02□□□□□ -0.33
VRK1Q99986 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
VRK1Q99986 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.02□□□□□ -0.33
VRK1Q99986 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.02□□□□□ -0.33
VRK1Q99986 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
VRK1Q99986 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.02□□□□□ -0.33
VRK1Q99986 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.02□□□□□ -0.33
VRK1Q99986 AC078819.1-201ENST00000547454 765 ntBASIC13.02□□□□□ -0.33
VRK1Q99986 AC012085.1-201ENST00000548270 765 ntBASIC13.02□□□□□ -0.33
VRK1Q99986 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.02□□□□□ -0.33
VRK1Q99986 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.02□□□□□ -0.33
VRK1Q99986 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.02□□□□□ -0.33
VRK1Q99986 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.02□□□□□ -0.33
VRK1Q99986 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.02□□□□□ -0.33
VRK1Q99986 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.02□□□□□ -0.33
VRK1Q99986 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.02□□□□□ -0.33
VRK1Q99986 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.02□□□□□ -0.33
VRK1Q99986 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 AC132938.4-201ENST00000623835 848 ntBASIC13.02□□□□□ -0.33
VRK1Q99986 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.02□□□□□ -0.33
VRK1Q99986 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
VRK1Q99986 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.02□□□□□ -0.33
VRK1Q99986 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
VRK1Q99986 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 AC027612.1-201ENST00000445234 2395 ntBASIC13.02□□□□□ -0.33
VRK1Q99986 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.02□□□□□ -0.33
VRK1Q99986 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.02□□□□□ -0.33
VRK1Q99986 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
VRK1Q99986 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.02□□□□□ -0.33
VRK1Q99986 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
VRK1Q99986 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.02□□□□□ -0.33
VRK1Q99986 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.02□□□□□ -0.33
VRK1Q99986 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.02□□□□□ -0.33
VRK1Q99986 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.02□□□□□ -0.33
VRK1Q99986 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
VRK1Q99986 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
VRK1Q99986 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
VRK1Q99986 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VRK1Q99986 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
VRK1Q99986 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
VRK1Q99986 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.01□□□□□ -0.33
VRK1Q99986 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.01□□□□□ -0.33
VRK1Q99986 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
VRK1Q99986 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
VRK1Q99986 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
VRK1Q99986 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
VRK1Q99986 MIR1202-201ENST00000408529 83 ntBASIC13.01□□□□□ -0.33
VRK1Q99986 CNN2P8-201ENST00000421872 913 ntBASIC13.01□□□□□ -0.33
VRK1Q99986 ACTBP11-201ENST00000436287 1126 ntBASIC13.01□□□□□ -0.33
VRK1Q99986 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.01□□□□□ -0.33
VRK1Q99986 AL590640.2-201ENST00000457038 527 ntBASIC13.01□□□□□ -0.33
VRK1Q99986 RNA5SP486-201ENST00000515961 83 ntBASIC13.01□□□□□ -0.33
VRK1Q99986 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.01□□□□□ -0.33
VRK1Q99986 SAMD11P1-201ENST00000571429 661 ntBASIC13.01□□□□□ -0.33
VRK1Q99986 MIR4538-201ENST00000581377 78 ntBASIC13.01□□□□□ -0.33
VRK1Q99986 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.01□□□□□ -0.33
VRK1Q99986 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.01□□□□□ -0.33
VRK1Q99986 AC009542.2-202ENST00000619004 1067 ntBASIC13.01□□□□□ -0.33
VRK1Q99986 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
VRK1Q99986 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.01□□□□□ -0.33
VRK1Q99986 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 AL354989.2-201ENST00000435838 1540 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms