Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 USP17L6P-201ENST00000382470 1197 ntBASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 RPL37AP1-201ENST00000412502 279 ntBASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 MED15P5-201ENST00000423150 992 ntBASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 GPS2P2-201ENST00000430745 888 ntBASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 RBPMS2P1-201ENST00000437762 623 ntBASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 AK2P2-201ENST00000439142 405 ntBASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 RN7SL618P-201ENST00000477850 296 ntBASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 GCOM2-201ENST00000509133 1104 ntBASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 SDHAP3-202ENST00000515467 728 ntBASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 AC022616.1-201ENST00000518688 554 ntBASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 MIR4453-201ENST00000584019 89 ntBASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 AP001002.3-201ENST00000623482 206 ntBASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 AC107375.1-201ENST00000564464 2231 ntBASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 AC010336.2-201ENST00000564226 506 ntBASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 AC051619.7-201ENST00000568314 623 ntBASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 AC138761.1-201ENST00000584393 385 ntBASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 AC140113.2-201ENST00000604370 208 ntBASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 AC027601.4-201ENST00000611259 610 ntBASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 AC115284.2-201ENST00000624646 2054 ntBASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 AC026271.4-201ENST00000578214 1833 ntBASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM4Q8WVI0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 AC131902.2-201ENST00000566892 2172 ntBASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 AC060814.4-201ENST00000594169 2163 ntBASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SMIM4Q8WVI0 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms