Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 AL132780.4-201ENST00000624870 1135 ntBASIC8.71□□□□□ -1.02
SVIPQ8NHG7 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 ADGRF3-201ENST00000311519 3240 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 PPP1R17-201ENST00000342032 2268 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 INO80-211ENST00000616814 4272 ntTSL 5 BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 USP20-203ENST00000372429 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 FAM172A-201ENST00000395965 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 ASH2L-202ENST00000428278 2678 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 AF131215.6-201ENST00000602575 2014 ntBASIC8.71□□□□□ -1.02
SVIPQ8NHG7 RBM19-203ENST00000545145 4422 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 WWP2-216ENST00000569174 2474 ntTSL 5 BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 TNFSF11-204ENST00000405262 2135 ntTSL 5 BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 AP002495.1-204ENST00000529844 1781 ntTSL 2 BASIC8.71□□□□□ -1.02
SVIPQ8NHG7 KRT16P6-202ENST00000425692 1426 ntBASIC8.71□□□□□ -1.02
SVIPQ8NHG7 AC080013.1-204ENST00000607426 2185 ntBASIC8.71□□□□□ -1.02
SVIPQ8NHG7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 PDCD4-202ENST00000393104 3697 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 RAD51D-202ENST00000345365 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 TIMP2-203ENST00000585421 3345 ntTSL 3 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 AC087762.2-201ENST00000639346 3773 ntBASIC8.7□□□□□ -1.02
SVIPQ8NHG7 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 NLRP12-202ENST00000345770 3547 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 AL607033.1-201ENST00000623900 1599 ntBASIC8.7□□□□□ -1.02
SVIPQ8NHG7 STAU1-205ENST00000371802 3154 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 RBM7-209ENST00000624815 3587 ntTSL 3 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 IPO4-201ENST00000354464 3646 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 AL360294.1-201ENST00000640945 2438 ntBASIC8.7□□□□□ -1.02
SVIPQ8NHG7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 AC006144.1-201ENST00000424220 1600 ntBASIC8.7□□□□□ -1.02
SVIPQ8NHG7 FHIT-204ENST00000468189 1634 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 AKAP10-201ENST00000225737 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 ANO1-207ENST00000530676 3289 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 ACACB-202ENST00000377848 9247 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 GRHL3-202ENST00000350501 2119 ntTSL 2 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 CICP27-201ENST00000442987 3812 ntBASIC8.7□□□□□ -1.02
SVIPQ8NHG7 MVK-208ENST00000539696 608 ntTSL 5 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 AC005154.1-216ENST00000582145 1101 ntTSL 5 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 OR7A8P-201ENST00000595427 913 ntBASIC8.7□□□□□ -1.02
SVIPQ8NHG7 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC8.7□□□□□ -1.02
SVIPQ8NHG7 LINC00969-233ENST00000597871 839 ntTSL 5 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 NAPGP1-201ENST00000603818 719 ntBASIC8.7□□□□□ -1.02
SVIPQ8NHG7 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 ENSA-215ENST00000638926 360 ntTSL 5 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 AC011365.1-201ENST00000522615 3478 ntTSL 2 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 AC096642.1-201ENST00000612055 2614 ntBASIC8.7□□□□□ -1.02
SVIPQ8NHG7 PCDHGA10-202ENST00000612503 4462 ntAPPRIS ALT2 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 ZNF155-209ENST00000611002 2732 ntAPPRIS P3 TSL 4 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 LAMA4-219ENST00000522006 6438 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 NOP2-218ENST00000545200 2751 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 TMCC2-203ENST00000358024 3738 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 PADI6-201ENST00000619609 2396 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 RYR1-201ENST00000355481 15377 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 VPS39-201ENST00000318006 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 AC010478.1-201ENST00000601500 6762 ntBASIC8.7□□□□□ -1.02
SVIPQ8NHG7 RAB37-212ENST00000528438 1494 ntTSL 2 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 LINC01550-202ENST00000502187 2455 ntTSL 2 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 DDX3X-216ENST00000626301 3013 ntTSL 5 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 AL391244.3-201ENST00000607307 1523 ntBASIC8.7□□□□□ -1.02
SVIPQ8NHG7 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 HAP1-201ENST00000310778 4087 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SVIPQ8NHG7 TRPS1-211ENST00000520276 4083 ntTSL 2 BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms