Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 COQ4-204ENST00000608951 781 ntTSL 2 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 AC018529.2-202ENST00000611482 3087 ntBASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 HLA-DPA2-205ENST00000433582 733 ntBASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 SLC25A15P3-201ENST00000505530 290 ntBASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 EEF1GP8-201ENST00000506566 1154 ntBASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 AC068831.5-201ENST00000557387 328 ntBASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 ABHD17AP9-201ENST00000561925 548 ntBASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 MIR6074-201ENST00000612054 107 ntBASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC15.77■□□□□ 0.12
KLHDC9Q8NEP7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 AC007952.5-201ENST00000572818 1486 ntBASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
KLHDC9Q8NEP7 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 AL109809.1-201ENST00000418979 1367 ntBASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 AP000354.1-201ENST00000396982 456 ntBASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 PSAT1P2-201ENST00000426107 972 ntBASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 VENTXP4-201ENST00000449029 958 ntBASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 RN7SKP155-201ENST00000516031 288 ntBASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 AC092862.1-201ENST00000541534 533 ntBASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.76■□□□□ 0.11
KLHDC9Q8NEP7 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms