Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 AC064801.2-201ENST00000625052 1303 ntBASIC17.3■□□□□ 0.36
SLF2Q8IX21 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.3■□□□□ 0.36
SLF2Q8IX21 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.3■□□□□ 0.36
SLF2Q8IX21 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLF2Q8IX21 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF2Q8IX21 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLF2Q8IX21 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF2Q8IX21 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SLF2Q8IX21 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLF2Q8IX21 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.3■□□□□ 0.36
SLF2Q8IX21 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.3■□□□□ 0.36
SLF2Q8IX21 RN7SL81P-201ENST00000493781 261 ntBASIC17.3■□□□□ 0.36
SLF2Q8IX21 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.3■□□□□ 0.36
SLF2Q8IX21 AC022447.6-201ENST00000515522 438 ntBASIC17.3■□□□□ 0.36
SLF2Q8IX21 AP002803.1-201ENST00000528836 498 ntBASIC17.3■□□□□ 0.36
SLF2Q8IX21 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.3■□□□□ 0.36
SLF2Q8IX21 AC138894.2-201ENST00000602838 371 ntBASIC17.3■□□□□ 0.36
SLF2Q8IX21 AC092171.5-201ENST00000608012 942 ntBASIC17.3■□□□□ 0.36
SLF2Q8IX21 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF2Q8IX21 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.3■□□□□ 0.36
SLF2Q8IX21 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF2Q8IX21 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLF2Q8IX21 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF2Q8IX21 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
SLF2Q8IX21 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF2Q8IX21 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLF2Q8IX21 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SLF2Q8IX21 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF2Q8IX21 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLF2Q8IX21 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLF2Q8IX21 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SLF2Q8IX21 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLF2Q8IX21 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SLF2Q8IX21 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF2Q8IX21 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SLF2Q8IX21 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLF2Q8IX21 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF2Q8IX21 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SLF2Q8IX21 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
SLF2Q8IX21 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF2Q8IX21 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF2Q8IX21 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.29■□□□□ 0.36
SLF2Q8IX21 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
SLF2Q8IX21 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF2Q8IX21 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF2Q8IX21 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF2Q8IX21 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLF2Q8IX21 AL512430.1-201ENST00000392575 860 ntBASIC17.29■□□□□ 0.36
SLF2Q8IX21 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.29■□□□□ 0.36
SLF2Q8IX21 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.29■□□□□ 0.36
SLF2Q8IX21 AC104506.1-201ENST00000609247 429 ntBASIC17.29■□□□□ 0.36
SLF2Q8IX21 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.29■□□□□ 0.36
SLF2Q8IX21 AC242376.2-201ENST00000619355 883 ntBASIC17.29■□□□□ 0.36
SLF2Q8IX21 AC011491.1-203ENST00000637688 543 ntBASIC17.29■□□□□ 0.36
SLF2Q8IX21 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF2Q8IX21 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLF2Q8IX21 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF2Q8IX21 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF2Q8IX21 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.29■□□□□ 0.36
SLF2Q8IX21 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.29■□□□□ 0.36
SLF2Q8IX21 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLF2Q8IX21 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SLF2Q8IX21 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.29■□□□□ 0.36
SLF2Q8IX21 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SLF2Q8IX21 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLF2Q8IX21 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.29■□□□□ 0.36
SLF2Q8IX21 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.29■□□□□ 0.36
SLF2Q8IX21 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLF2Q8IX21 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.28■□□□□ 0.36
SLF2Q8IX21 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLF2Q8IX21 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLF2Q8IX21 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF2Q8IX21 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SLF2Q8IX21 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF2Q8IX21 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC17.28■□□□□ 0.36
SLF2Q8IX21 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF2Q8IX21 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLF2Q8IX21 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.28■□□□□ 0.36
SLF2Q8IX21 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SLF2Q8IX21 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.28■□□□□ 0.36
SLF2Q8IX21 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.28■□□□□ 0.36
SLF2Q8IX21 AC073869.2-201ENST00000417338 1026 ntBASIC17.28■□□□□ 0.36
SLF2Q8IX21 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC17.28■□□□□ 0.36
SLF2Q8IX21 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF2Q8IX21 AC253536.4-201ENST00000440539 267 ntBASIC17.28■□□□□ 0.36
SLF2Q8IX21 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.28■□□□□ 0.36
SLF2Q8IX21 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.28■□□□□ 0.36
SLF2Q8IX21 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.28■□□□□ 0.36
SLF2Q8IX21 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.28■□□□□ 0.36
SLF2Q8IX21 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF2Q8IX21 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF2Q8IX21 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF2Q8IX21 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.28■□□□□ 0.36
SLF2Q8IX21 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLF2Q8IX21 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF2Q8IX21 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF2Q8IX21 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.28■□□□□ 0.36
SLF2Q8IX21 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLF2Q8IX21 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF2Q8IX21 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms