Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 ST13P19-201ENST00000442505 1124 ntBASIC15.48■□□□□ 0.07
VARS2Q5ST30 AC104784.1-201ENST00000473096 294 ntBASIC15.48■□□□□ 0.07
VARS2Q5ST30 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 AC008723.1-201ENST00000506922 207 ntBASIC15.48■□□□□ 0.07
VARS2Q5ST30 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 IQSEC3P1-201ENST00000538799 536 ntBASIC15.48■□□□□ 0.07
VARS2Q5ST30 AC027237.1-201ENST00000560942 655 ntBASIC15.48■□□□□ 0.07
VARS2Q5ST30 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 AC124068.2-201ENST00000569473 1109 ntBASIC15.48■□□□□ 0.07
VARS2Q5ST30 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 AC092964.1-201ENST00000623304 1399 ntBASIC15.48■□□□□ 0.07
VARS2Q5ST30 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 RNA5SP359-201ENST00000364838 113 ntBASIC15.47■□□□□ 0.07
VARS2Q5ST30 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 AC026320.2-201ENST00000434379 478 ntBASIC15.47■□□□□ 0.07
VARS2Q5ST30 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 RN7SL67P-201ENST00000492147 296 ntBASIC15.47■□□□□ 0.07
VARS2Q5ST30 AC019193.1-201ENST00000506678 823 ntBASIC15.47■□□□□ 0.07
VARS2Q5ST30 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 AC017076.1-201ENST00000607613 578 ntBASIC15.47■□□□□ 0.07
VARS2Q5ST30 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 LINC01783-202ENST00000614408 828 ntBASIC15.47■□□□□ 0.07
VARS2Q5ST30 BX284668.2-205ENST00000619677 828 ntBASIC15.47■□□□□ 0.07
VARS2Q5ST30 AC007718.1-201ENST00000621078 280 ntBASIC15.47■□□□□ 0.07
VARS2Q5ST30 AC097655.1-201ENST00000635075 318 ntBASIC15.47■□□□□ 0.07
VARS2Q5ST30 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 FAM90A2P-201ENST00000511144 1395 ntBASIC15.47■□□□□ 0.07
VARS2Q5ST30 FAM90A25P-201ENST00000528404 1395 ntBASIC15.47■□□□□ 0.07
VARS2Q5ST30 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.47■□□□□ 0.07
VARS2Q5ST30 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARS2Q5ST30 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARS2Q5ST30 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 227.8 ms