Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 HNRNPA3P6-201ENST00000472163 1006 ntBASIC20.9■□□□□ 0.94
ATP7AQ04656 CD44-224ENST00000526669 870 ntTSL 5 BASIC20.9■□□□□ 0.94
ATP7AQ04656 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP7AQ04656 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC20.9■□□□□ 0.94
ATP7AQ04656 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP7AQ04656 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP7AQ04656 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP7AQ04656 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP7AQ04656 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP7AQ04656 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP7AQ04656 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
ATP7AQ04656 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP7AQ04656 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP7AQ04656 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP7AQ04656 CTSL-202ENST00000342020 933 ntTSL 2 BASIC20.89■□□□□ 0.94
ATP7AQ04656 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP7AQ04656 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP7AQ04656 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP7AQ04656 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
ATP7AQ04656 RPL10-203ENST00000406022 748 ntTSL 3 BASIC20.89■□□□□ 0.94
ATP7AQ04656 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC20.89■□□□□ 0.94
ATP7AQ04656 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ATP7AQ04656 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC20.89■□□□□ 0.94
ATP7AQ04656 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC20.89■□□□□ 0.94
ATP7AQ04656 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC20.89■□□□□ 0.94
ATP7AQ04656 AL022313.4-201ENST00000562756 2046 ntBASIC20.89■□□□□ 0.94
ATP7AQ04656 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC20.89■□□□□ 0.94
ATP7AQ04656 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ATP7AQ04656 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC20.89■□□□□ 0.94
ATP7AQ04656 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC20.89■□□□□ 0.94
ATP7AQ04656 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC20.89■□□□□ 0.94
ATP7AQ04656 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP7AQ04656 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP7AQ04656 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP7AQ04656 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.89■□□□□ 0.93
ATP7AQ04656 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ATP7AQ04656 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ATP7AQ04656 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP7AQ04656 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP7AQ04656 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.89■□□□□ 0.93
ATP7AQ04656 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP7AQ04656 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP7AQ04656 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP7AQ04656 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ATP7AQ04656 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP7AQ04656 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ATP7AQ04656 HMGA1P1-201ENST00000415560 1062 ntBASIC20.88■□□□□ 0.93
ATP7AQ04656 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP7AQ04656 AC078814.4-201ENST00000546650 327 ntBASIC20.88■□□□□ 0.93
ATP7AQ04656 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC20.88■□□□□ 0.93
ATP7AQ04656 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP7AQ04656 GARS-210ENST00000627489 324 ntTSL 4 BASIC20.88■□□□□ 0.93
ATP7AQ04656 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP7AQ04656 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ATP7AQ04656 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC20.88■□□□□ 0.93
ATP7AQ04656 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ATP7AQ04656 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP7AQ04656 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP7AQ04656 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP7AQ04656 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP7AQ04656 GPI-205ENST00000586425 1799 ntTSL 5 BASIC20.88■□□□□ 0.93
ATP7AQ04656 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP7AQ04656 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP7AQ04656 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP7AQ04656 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
ATP7AQ04656 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.88■□□□□ 0.93
ATP7AQ04656 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP7AQ04656 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP7AQ04656 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ATP7AQ04656 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ATP7AQ04656 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP7AQ04656 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ATP7AQ04656 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP7AQ04656 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC20.88■□□□□ 0.93
ATP7AQ04656 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC20.88■□□□□ 0.93
ATP7AQ04656 MIR8071-1-201ENST00000616769 65 ntBASIC20.88■□□□□ 0.93
ATP7AQ04656 MIR8071-2-201ENST00000616772 65 ntBASIC20.88■□□□□ 0.93
ATP7AQ04656 MTHFR-210ENST00000641407 2387 ntBASIC20.88■□□□□ 0.93
ATP7AQ04656 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP7AQ04656 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP7AQ04656 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP7AQ04656 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP7AQ04656 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP7AQ04656 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP7AQ04656 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP7AQ04656 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP7AQ04656 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP7AQ04656 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP7AQ04656 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.87■□□□□ 0.93
ATP7AQ04656 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC20.87■□□□□ 0.93
ATP7AQ04656 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP7AQ04656 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP7AQ04656 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP7AQ04656 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP7AQ04656 AC073347.1-201ENST00000421633 2643 ntBASIC20.87■□□□□ 0.93
ATP7AQ04656 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ATP7AQ04656 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ATP7AQ04656 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP7AQ04656 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP7AQ04656 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms