Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.42■□□□□ 0.22
CCNA1P78396 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.42■□□□□ 0.22
CCNA1P78396 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.42■□□□□ 0.22
CCNA1P78396 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.42■□□□□ 0.22
CCNA1P78396 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.42■□□□□ 0.22
CCNA1P78396 NDUFB10P1-201ENST00000567319 521 ntBASIC16.42■□□□□ 0.22
CCNA1P78396 AL022344.2-201ENST00000568976 968 ntBASIC16.42■□□□□ 0.22
CCNA1P78396 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.42■□□□□ 0.22
CCNA1P78396 AC073592.2-201ENST00000623062 780 ntBASIC16.42■□□□□ 0.22
CCNA1P78396 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNA1P78396 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCNA1P78396 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCNA1P78396 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNA1P78396 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCNA1P78396 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.42■□□□□ 0.22
CCNA1P78396 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCNA1P78396 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.42■□□□□ 0.22
CCNA1P78396 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNA1P78396 AL109954.1-202ENST00000564051 2148 ntBASIC16.42■□□□□ 0.22
CCNA1P78396 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNA1P78396 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNA1P78396 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNA1P78396 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CCNA1P78396 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNA1P78396 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CCNA1P78396 AC021305.1-201ENST00000520656 1514 ntBASIC16.41■□□□□ 0.22
CCNA1P78396 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CCNA1P78396 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNA1P78396 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
CCNA1P78396 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCNA1P78396 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCNA1P78396 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCNA1P78396 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCNA1P78396 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.41■□□□□ 0.22
CCNA1P78396 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.41■□□□□ 0.22
CCNA1P78396 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.41■□□□□ 0.22
CCNA1P78396 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.41■□□□□ 0.22
CCNA1P78396 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.41■□□□□ 0.22
CCNA1P78396 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.41■□□□□ 0.22
CCNA1P78396 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.41■□□□□ 0.22
CCNA1P78396 SORD2P-201ENST00000558556 1069 ntBASIC16.41■□□□□ 0.22
CCNA1P78396 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.41■□□□□ 0.22
CCNA1P78396 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.41■□□□□ 0.22
CCNA1P78396 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.41■□□□□ 0.22
CCNA1P78396 AC002044.2-201ENST00000624910 970 ntBASIC16.41■□□□□ 0.22
CCNA1P78396 AL451007.2-201ENST00000632004 563 ntBASIC16.41■□□□□ 0.22
CCNA1P78396 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNA1P78396 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNA1P78396 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CCNA1P78396 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.41■□□□□ 0.22
CCNA1P78396 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNA1P78396 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CCNA1P78396 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNA1P78396 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.41■□□□□ 0.22
CCNA1P78396 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCNA1P78396 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
CCNA1P78396 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNA1P78396 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNA1P78396 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.41■□□□□ 0.22
CCNA1P78396 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.41■□□□□ 0.22
CCNA1P78396 AC018442.1-201ENST00000421439 2061 ntBASIC16.41■□□□□ 0.22
CCNA1P78396 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCNA1P78396 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCNA1P78396 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNA1P78396 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCNA1P78396 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNA1P78396 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNA1P78396 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.4■□□□□ 0.22
CCNA1P78396 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCNA1P78396 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNA1P78396 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNA1P78396 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.4■□□□□ 0.22
CCNA1P78396 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNA1P78396 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNA1P78396 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.4■□□□□ 0.22
CCNA1P78396 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNA1P78396 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.4■□□□□ 0.22
CCNA1P78396 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCNA1P78396 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNA1P78396 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.4■□□□□ 0.22
CCNA1P78396 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNA1P78396 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC16.4■□□□□ 0.22
CCNA1P78396 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCNA1P78396 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.4■□□□□ 0.22
CCNA1P78396 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.4■□□□□ 0.22
CCNA1P78396 AL139008.1-201ENST00000437894 228 ntBASIC16.4■□□□□ 0.22
CCNA1P78396 AC010234.1-201ENST00000494599 870 ntBASIC16.4■□□□□ 0.22
CCNA1P78396 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.4■□□□□ 0.22
CCNA1P78396 HINT1-205ENST00000508488 703 ntTSL 2 BASIC16.4■□□□□ 0.22
CCNA1P78396 RNA5SP406-201ENST00000516106 112 ntBASIC16.4■□□□□ 0.22
CCNA1P78396 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.4■□□□□ 0.22
CCNA1P78396 AC226150.1-201ENST00000544259 466 ntBASIC16.4■□□□□ 0.22
CCNA1P78396 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.4■□□□□ 0.22
CCNA1P78396 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCNA1P78396 LINC00244-201ENST00000625073 613 ntBASIC16.4■□□□□ 0.22
CCNA1P78396 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.4■□□□□ 0.22
CCNA1P78396 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.4■□□□□ 0.22
CCNA1P78396 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.4■□□□□ 0.22
CCNA1P78396 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCNA1P78396 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms