Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN8P56748 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 USP17L6P-201ENST00000382470 1197 ntBASIC13.88□□□□□ -0.19
CLDN8P56748 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CLDN8P56748 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDN8P56748 AP006294.1-201ENST00000415407 339 ntBASIC13.88□□□□□ -0.19
CLDN8P56748 CD8B2-202ENST00000417670 633 ntBASIC13.88□□□□□ -0.19
CLDN8P56748 CICP12-201ENST00000455801 843 ntBASIC13.88□□□□□ -0.19
CLDN8P56748 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.88□□□□□ -0.19
CLDN8P56748 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN8P56748 TERF1P3-201ENST00000505638 1227 ntBASIC13.88□□□□□ -0.19
CLDN8P56748 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.88□□□□□ -0.19
CLDN8P56748 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 MIR4745-201ENST00000577608 62 ntBASIC13.88□□□□□ -0.19
CLDN8P56748 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.88□□□□□ -0.19
CLDN8P56748 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.88□□□□□ -0.19
CLDN8P56748 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDN8P56748 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN8P56748 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDN8P56748 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDN8P56748 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CLDN8P56748 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDN8P56748 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN8P56748 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CLDN8P56748 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
CLDN8P56748 AC015909.5-201ENST00000624336 2266 ntBASIC13.88□□□□□ -0.19
CLDN8P56748 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CLDN8P56748 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CLDN8P56748 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN8P56748 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN8P56748 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CLDN8P56748 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CLDN8P56748 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN8P56748 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.87□□□□□ -0.19
CLDN8P56748 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.87□□□□□ -0.19
CLDN8P56748 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN8P56748 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 AC092933.1-201ENST00000393644 945 ntBASIC13.87□□□□□ -0.19
CLDN8P56748 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN8P56748 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.87□□□□□ -0.19
CLDN8P56748 C2orf27AP3-201ENST00000434123 579 ntBASIC13.87□□□□□ -0.19
CLDN8P56748 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.87□□□□□ -0.19
CLDN8P56748 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN8P56748 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN8P56748 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN8P56748 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.87□□□□□ -0.19
CLDN8P56748 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.87□□□□□ -0.19
CLDN8P56748 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.87□□□□□ -0.19
CLDN8P56748 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN8P56748 MIR4683-201ENST00000579659 81 ntBASIC13.87□□□□□ -0.19
CLDN8P56748 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.87□□□□□ -0.19
CLDN8P56748 AL354718.3-201ENST00000616414 581 ntBASIC13.87□□□□□ -0.19
CLDN8P56748 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.87□□□□□ -0.19
CLDN8P56748 CR382287.1-201ENST00000623954 586 ntBASIC13.87□□□□□ -0.19
CLDN8P56748 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.87□□□□□ -0.19
CLDN8P56748 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN8P56748 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN8P56748 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.87□□□□□ -0.19
CLDN8P56748 AC072061.1-201ENST00000569710 2234 ntBASIC13.87□□□□□ -0.19
CLDN8P56748 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
CLDN8P56748 AC126335.2-201ENST00000623362 4637 ntBASIC13.87□□□□□ -0.19
CLDN8P56748 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN8P56748 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN8P56748 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN8P56748 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CLDN8P56748 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN8P56748 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN8P56748 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN8P56748 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN8P56748 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms