Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A1P43005 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC1A1P43005 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.28■□□□□ 0.04
SLC1A1P43005 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.28■□□□□ 0.04
SLC1A1P43005 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A1P43005 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A1P43005 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC1A1P43005 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC1A1P43005 BTNL10-201ENST00000595971 695 ntBASIC15.28■□□□□ 0.04
SLC1A1P43005 AC073413.1-201ENST00000603927 732 ntBASIC15.28■□□□□ 0.04
SLC1A1P43005 AL358472.3-201ENST00000608147 415 ntBASIC15.28■□□□□ 0.04
SLC1A1P43005 ZACNP1-201ENST00000612259 710 ntBASIC15.28■□□□□ 0.04
SLC1A1P43005 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC1A1P43005 AC025048.6-201ENST00000634326 1161 ntBASIC15.28■□□□□ 0.04
SLC1A1P43005 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC1A1P43005 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A1P43005 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A1P43005 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A1P43005 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A1P43005 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SLC1A1P43005 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A1P43005 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A1P43005 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SLC1A1P43005 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A1P43005 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A1P43005 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SLC1A1P43005 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC1A1P43005 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A1P43005 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A1P43005 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A1P43005 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SLC1A1P43005 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A1P43005 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A1P43005 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC1A1P43005 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A1P43005 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC1A1P43005 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A1P43005 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A1P43005 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC1A1P43005 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC1A1P43005 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC1A1P43005 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A1P43005 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.27■□□□□ 0.04
SLC1A1P43005 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SLC1A1P43005 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SLC1A1P43005 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.27■□□□□ 0.04
SLC1A1P43005 AC138951.2-201ENST00000623455 1161 ntBASIC15.27■□□□□ 0.04
SLC1A1P43005 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC1A1P43005 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A1P43005 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A1P43005 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A1P43005 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A1P43005 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A1P43005 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A1P43005 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SLC1A1P43005 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SLC1A1P43005 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SLC1A1P43005 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A1P43005 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A1P43005 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A1P43005 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A1P43005 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SLC1A1P43005 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A1P43005 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A1P43005 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A1P43005 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A1P43005 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A1P43005 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A1P43005 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A1P43005 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 AC006001.1-201ENST00000325130 474 ntBASIC15.26■□□□□ 0.03
SLC1A1P43005 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A1P43005 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A1P43005 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A1P43005 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A1P43005 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A1P43005 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
SLC1A1P43005 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC1A1P43005 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A1P43005 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SLC1A1P43005 AC078819.1-201ENST00000547454 765 ntBASIC15.26■□□□□ 0.03
SLC1A1P43005 AC012085.1-201ENST00000548270 765 ntBASIC15.26■□□□□ 0.03
SLC1A1P43005 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A1P43005 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 AC008735.3-201ENST00000596646 500 ntBASIC15.26■□□□□ 0.03
SLC1A1P43005 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC1A1P43005 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A1P43005 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A1P43005 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms