Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.15■□□□□ 0.34
TOP1P11387 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TOP1P11387 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TOP1P11387 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
TOP1P11387 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP1P11387 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.15■□□□□ 0.34
TOP1P11387 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TOP1P11387 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.15■□□□□ 0.34
TOP1P11387 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP1P11387 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.15■□□□□ 0.34
TOP1P11387 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.15■□□□□ 0.34
TOP1P11387 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.15■□□□□ 0.34
TOP1P11387 RBM8B-201ENST00000555532 525 ntBASIC17.15■□□□□ 0.34
TOP1P11387 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.15■□□□□ 0.34
TOP1P11387 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.15■□□□□ 0.34
TOP1P11387 NDUFV2P1-201ENST00000596415 907 ntBASIC17.15■□□□□ 0.34
TOP1P11387 AL645939.5-201ENST00000606834 243 ntBASIC17.15■□□□□ 0.34
TOP1P11387 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TOP1P11387 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP1P11387 AC144522.1-201ENST00000625111 1658 ntBASIC17.15■□□□□ 0.34
TOP1P11387 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TOP1P11387 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.15■□□□□ 0.34
TOP1P11387 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TOP1P11387 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP1P11387 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TOP1P11387 TUBBP5-203ENST00000508529 1334 ntBASIC17.15■□□□□ 0.34
TOP1P11387 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.15■□□□□ 0.34
TOP1P11387 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP1P11387 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP1P11387 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.15■□□□□ 0.34
TOP1P11387 AC136759.1-202ENST00000530858 2194 ntBASIC17.15■□□□□ 0.34
TOP1P11387 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TOP1P11387 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TOP1P11387 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP1P11387 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TOP1P11387 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TOP1P11387 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
TOP1P11387 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TOP1P11387 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.15■□□□□ 0.34
TOP1P11387 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TOP1P11387 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
TOP1P11387 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
TOP1P11387 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.14■□□□□ 0.33
TOP1P11387 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TOP1P11387 AC067750.1-201ENST00000608826 6545 ntBASIC17.14■□□□□ 0.33
TOP1P11387 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.14■□□□□ 0.33
TOP1P11387 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
TOP1P11387 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC17.14■□□□□ 0.33
TOP1P11387 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.14■□□□□ 0.33
TOP1P11387 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.14■□□□□ 0.33
TOP1P11387 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.14■□□□□ 0.33
TOP1P11387 AC104581.4-201ENST00000623126 3052 ntBASIC17.14■□□□□ 0.33
TOP1P11387 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.14■□□□□ 0.33
TOP1P11387 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.14■□□□□ 0.33
TOP1P11387 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.14■□□□□ 0.33
TOP1P11387 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.14■□□□□ 0.33
TOP1P11387 AC006122.1-201ENST00000493323 440 ntBASIC17.14■□□□□ 0.33
TOP1P11387 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.14■□□□□ 0.33
TOP1P11387 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.14■□□□□ 0.33
TOP1P11387 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.14■□□□□ 0.33
TOP1P11387 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.14■□□□□ 0.33
TOP1P11387 ACTG1P17-201ENST00000558391 1119 ntBASIC17.14■□□□□ 0.33
TOP1P11387 AL132994.2-201ENST00000603120 687 ntBASIC17.14■□□□□ 0.33
TOP1P11387 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.14■□□□□ 0.33
TOP1P11387 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TOP1P11387 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.14■□□□□ 0.33
TOP1P11387 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
TOP1P11387 AC015656.1-201ENST00000624209 3578 ntBASIC17.14■□□□□ 0.33
TOP1P11387 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.14■□□□□ 0.33
TOP1P11387 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP1P11387 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.13■□□□□ 0.33
TOP1P11387 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
TOP1P11387 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TOP1P11387 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.13■□□□□ 0.33
TOP1P11387 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.13■□□□□ 0.33
TOP1P11387 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms