Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CXCL1P09341 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CXCL1P09341 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CXCL1P09341 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CXCL1P09341 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CXCL1P09341 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CXCL1P09341 AC215219.1-201ENST00000400706 1817 ntBASIC11.35□□□□□ -0.59
CXCL1P09341 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.35□□□□□ -0.59
CXCL1P09341 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CXCL1P09341 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.35□□□□□ -0.59
CXCL1P09341 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
CXCL1P09341 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CXCL1P09341 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
CXCL1P09341 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CXCL1P09341 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.34□□□□□ -0.59
CXCL1P09341 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
CXCL1P09341 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
CXCL1P09341 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
CXCL1P09341 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.34□□□□□ -0.59
CXCL1P09341 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
CXCL1P09341 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.34□□□□□ -0.59
CXCL1P09341 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CXCL1P09341 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
CXCL1P09341 SPDYE11-202ENST00000450699 704 ntBASIC11.34□□□□□ -0.59
CXCL1P09341 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
CXCL1P09341 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
CXCL1P09341 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.34□□□□□ -0.59
CXCL1P09341 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC11.34□□□□□ -0.59
CXCL1P09341 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 AC243562.1-201ENST00000560672 389 ntBASIC11.34□□□□□ -0.59
CXCL1P09341 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 RARRES2P9-201ENST00000565168 469 ntBASIC11.34□□□□□ -0.59
CXCL1P09341 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.34□□□□□ -0.59
CXCL1P09341 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.34□□□□□ -0.59
CXCL1P09341 SPDYE9P-201ENST00000570642 692 ntBASIC11.34□□□□□ -0.59
CXCL1P09341 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC11.34□□□□□ -0.59
CXCL1P09341 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 AC026120.1-201ENST00000611536 926 ntBASIC11.34□□□□□ -0.59
CXCL1P09341 SPDYE10P-202ENST00000612005 668 ntBASIC11.34□□□□□ -0.59
CXCL1P09341 SPDYE8P-202ENST00000612377 668 ntBASIC11.34□□□□□ -0.59
CXCL1P09341 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.34□□□□□ -0.59
CXCL1P09341 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
CXCL1P09341 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CXCL1P09341 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC11.34□□□□□ -0.59
CXCL1P09341 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC11.34□□□□□ -0.59
CXCL1P09341 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.34□□□□□ -0.59
CXCL1P09341 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC11.34□□□□□ -0.59
CXCL1P09341 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.34□□□□□ -0.59
CXCL1P09341 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC11.34□□□□□ -0.59
CXCL1P09341 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC11.34□□□□□ -0.59
CXCL1P09341 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC11.34□□□□□ -0.59
CXCL1P09341 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CXCL1P09341 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.33□□□□□ -0.6
CXCL1P09341 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.33□□□□□ -0.6
CXCL1P09341 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC11.33□□□□□ -0.6
CXCL1P09341 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
CXCL1P09341 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.33□□□□□ -0.6
CXCL1P09341 DDC-214ENST00000622873 1839 ntTSL 3 BASIC11.33□□□□□ -0.6
CXCL1P09341 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
CXCL1P09341 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms