Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CEACAM4O75871 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM4O75871 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM4O75871 AC091951.1-201ENST00000512854 2465 ntBASIC13.06□□□□□ -0.32
CEACAM4O75871 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM4O75871 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CEACAM4O75871 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM4O75871 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM4O75871 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.06□□□□□ -0.32
CEACAM4O75871 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM4O75871 AL672207.1-201ENST00000328462 1570 ntBASIC13.06□□□□□ -0.32
CEACAM4O75871 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM4O75871 AC215219.1-201ENST00000400706 1817 ntBASIC13.06□□□□□ -0.32
CEACAM4O75871 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CEACAM4O75871 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM4O75871 FAM90A21P-201ENST00000510875 1396 ntBASIC13.06□□□□□ -0.32
CEACAM4O75871 FAM90A15P-201ENST00000514465 1395 ntBASIC13.06□□□□□ -0.32
CEACAM4O75871 FAM90A6P-201ENST00000515148 1394 ntBASIC13.06□□□□□ -0.32
CEACAM4O75871 FAM90A16P-201ENST00000526662 1395 ntBASIC13.06□□□□□ -0.32
CEACAM4O75871 FAM90A9P-201ENST00000527940 1395 ntBASIC13.06□□□□□ -0.32
CEACAM4O75871 FAM90A5P-201ENST00000528738 1395 ntBASIC13.06□□□□□ -0.32
CEACAM4O75871 FAM90A14P-201ENST00000530386 1395 ntBASIC13.06□□□□□ -0.32
CEACAM4O75871 FAM90A13P-201ENST00000534703 1395 ntBASIC13.06□□□□□ -0.32
CEACAM4O75871 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CEACAM4O75871 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 AC006486.2-201ENST00000624246 2199 ntBASIC13.05□□□□□ -0.32
CEACAM4O75871 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CEACAM4O75871 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC13.05□□□□□ -0.32
CEACAM4O75871 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CEACAM4O75871 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM4O75871 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM4O75871 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
CEACAM4O75871 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM4O75871 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM4O75871 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.05□□□□□ -0.32
CEACAM4O75871 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CEACAM4O75871 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC13.05□□□□□ -0.32
CEACAM4O75871 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM4O75871 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC13.05□□□□□ -0.32
CEACAM4O75871 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CEACAM4O75871 HCG27-204ENST00000424675 895 ntTSL 3 BASIC13.05□□□□□ -0.32
CEACAM4O75871 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM4O75871 AC006529.1-201ENST00000459978 637 ntBASIC13.05□□□□□ -0.32
CEACAM4O75871 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CEACAM4O75871 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC13.05□□□□□ -0.32
CEACAM4O75871 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 OR2A1-AS1-210ENST00000496968 531 ntBASIC13.05□□□□□ -0.32
CEACAM4O75871 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 KLF17P1-201ENST00000547105 1126 ntBASIC13.05□□□□□ -0.32
CEACAM4O75871 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.05□□□□□ -0.32
CEACAM4O75871 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CEACAM4O75871 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM4O75871 MIR6746-201ENST00000620971 63 ntBASIC13.05□□□□□ -0.32
CEACAM4O75871 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM4O75871 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM4O75871 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
CEACAM4O75871 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CEACAM4O75871 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM4O75871 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM4O75871 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM4O75871 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.04□□□□□ -0.32
CEACAM4O75871 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM4O75871 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM4O75871 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM4O75871 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CEACAM4O75871 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM4O75871 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM4O75871 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CEACAM4O75871 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.04□□□□□ -0.32
CEACAM4O75871 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM4O75871 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.04□□□□□ -0.32
CEACAM4O75871 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.04□□□□□ -0.32
CEACAM4O75871 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CEACAM4O75871 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CEACAM4O75871 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
CEACAM4O75871 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM4O75871 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM4O75871 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.04□□□□□ -0.32
CEACAM4O75871 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM4O75871 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms