Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 TMEM14DP-201ENST00000422205 345 ntBASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 C2orf27AP3-201ENST00000434123 579 ntBASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 RN7SL713P-201ENST00000582127 302 ntBASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 AL354718.3-201ENST00000616414 581 ntBASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 CR382287.1-201ENST00000623954 586 ntBASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 AC025048.6-201ENST00000634326 1161 ntBASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 AC006453.4-201ENST00000636949 1252 ntBASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHA7Q9UN72 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 LINC02486-201ENST00000604157 3000 ntBASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 AL137784.3-201ENST00000623858 2288 ntBASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 AC015909.5-201ENST00000624336 2266 ntBASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 CNN2P8-201ENST00000421872 913 ntBASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 COX5BP1-201ENST00000507622 393 ntBASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHA7Q9UN72 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 AC015936.2-201ENST00000593177 259 ntBASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 AC233724.13-201ENST00000598383 410 ntBASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 AC008825.2-201ENST00000603374 718 ntBASIC16.55■□□□□ 0.24
PCDHA7Q9UN72 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms