Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0A4Q9HBG4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP6V0A4Q9HBG4 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP6V0A4Q9HBG4 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0A4Q9HBG4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
ATP6V0A4Q9HBG4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0A4Q9HBG4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0A4Q9HBG4 AGGF1P1-201ENST00000509500 2073 ntBASIC16.25■□□□□ 0.19
ATP6V0A4Q9HBG4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ATP6V0A4Q9HBG4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0A4Q9HBG4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0A4Q9HBG4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 IMP3P2-201ENST00000489760 475 ntBASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 AC006122.1-201ENST00000493323 440 ntBASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 HLA-J-204ENST00000495278 958 ntBASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 SCARNA21-201ENST00000517026 139 ntBASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 AC026740.1-201ENST00000607068 791 ntBASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0A4Q9HBG4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 KRT8P19-201ENST00000551916 1455 ntBASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 AC041040.2-201ENST00000622926 2899 ntBASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 MYADML-201ENST00000474610 2147 ntBASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms