Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC010632.2-201ENST00000588369 1224 ntBASIC14.85□□□□□ -0.03
PHOX2BQ99453 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.85□□□□□ -0.03
PHOX2BQ99453 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.85□□□□□ -0.03
PHOX2BQ99453 AC087821.1-201ENST00000623639 567 ntBASIC14.85□□□□□ -0.03
PHOX2BQ99453 AL356094.1-201ENST00000624663 1212 ntBASIC14.85□□□□□ -0.03
PHOX2BQ99453 AC002472.3-201ENST00000640124 621 ntBASIC14.85□□□□□ -0.03
PHOX2BQ99453 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHOX2BQ99453 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PHOX2BQ99453 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PHOX2BQ99453 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PHOX2BQ99453 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
PHOX2BQ99453 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PHOX2BQ99453 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHOX2BQ99453 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.85□□□□□ -0.03
PHOX2BQ99453 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.85□□□□□ -0.03
PHOX2BQ99453 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PHOX2BQ99453 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PHOX2BQ99453 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHOX2BQ99453 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.85□□□□□ -0.03
PHOX2BQ99453 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.85□□□□□ -0.03
PHOX2BQ99453 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.85□□□□□ -0.03
PHOX2BQ99453 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHOX2BQ99453 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PHOX2BQ99453 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHOX2BQ99453 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PHOX2BQ99453 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PHOX2BQ99453 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 DUTP3-201ENST00000450025 415 ntBASIC14.84□□□□□ -0.03
PHOX2BQ99453 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 AC083801.1-201ENST00000491689 358 ntBASIC14.84□□□□□ -0.03
PHOX2BQ99453 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 AC106047.2-201ENST00000511723 743 ntBASIC14.84□□□□□ -0.03
PHOX2BQ99453 ACTR6P1-201ENST00000514311 1104 ntBASIC14.84□□□□□ -0.03
PHOX2BQ99453 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 ZNF93-205ENST00000591366 590 ntTSL 3 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 NAV1-210ENST00000593583 726 ntBASIC14.84□□□□□ -0.03
PHOX2BQ99453 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHOX2BQ99453 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.84□□□□□ -0.03
PHOX2BQ99453 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.83□□□□□ -0.03
PHOX2BQ99453 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.83□□□□□ -0.03
PHOX2BQ99453 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.83□□□□□ -0.03
PHOX2BQ99453 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.83□□□□□ -0.03
PHOX2BQ99453 AC069224.1-201ENST00000566372 1715 ntBASIC14.83□□□□□ -0.03
PHOX2BQ99453 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PHOX2BQ99453 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.83□□□□□ -0.03
PHOX2BQ99453 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.04
PHOX2BQ99453 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 KRT17P5-201ENST00000332088 839 ntBASIC14.83□□□□□ -0.04
PHOX2BQ99453 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.83□□□□□ -0.04
PHOX2BQ99453 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC14.83□□□□□ -0.04
PHOX2BQ99453 DPY19L2P5-201ENST00000456300 331 ntBASIC14.83□□□□□ -0.04
PHOX2BQ99453 FTH1P22-201ENST00000456305 520 ntBASIC14.83□□□□□ -0.04
PHOX2BQ99453 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.83□□□□□ -0.04
PHOX2BQ99453 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC14.83□□□□□ -0.04
PHOX2BQ99453 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC14.83□□□□□ -0.04
PHOX2BQ99453 AC022616.1-201ENST00000518688 554 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms