Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 NDUFB10P1-201ENST00000567319 521 ntBASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 FBXO36P1-201ENST00000579006 471 ntBASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBGCP6Q96RT7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 NQO2-204ENST00000380454 851 ntTSL 2 BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 KRT18P4-201ENST00000422599 1288 ntBASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 AC025186.1-201ENST00000478174 870 ntBASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 MSANTD2P1-201ENST00000445341 1368 ntBASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 AP000354.1-201ENST00000396982 456 ntBASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 CTBP2P6-201ENST00000526402 1229 ntBASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBGCP6Q96RT7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 FKBP4P8-201ENST00000610931 1369 ntBASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 AL136379.1-201ENST00000623471 2642 ntBASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 OR52M2P-201ENST00000414298 959 ntBASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 AC010900.1-201ENST00000449849 1296 ntBASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 HIST1H2APS2-201ENST00000454426 370 ntBASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 EMC4-208ENST00000559078 599 ntTSL 3 BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBGCP6Q96RT7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBGCP6Q96RT7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBGCP6Q96RT7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TUBGCP6Q96RT7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBGCP6Q96RT7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms