Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC97Q96F63 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
CCDC97Q96F63 AC005229.1-201ENST00000392885 409 ntBASIC15.1■□□□□ 0.01
CCDC97Q96F63 AL355864.2-201ENST00000447420 863 ntBASIC15.1■□□□□ 0.01
CCDC97Q96F63 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC97Q96F63 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC97Q96F63 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC97Q96F63 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC97Q96F63 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC97Q96F63 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC97Q96F63 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC97Q96F63 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC97Q96F63 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC97Q96F63 GPR182-203ENST00000622922 591 ntBASIC15.1■□□□□ 0.01
CCDC97Q96F63 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC97Q96F63 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC97Q96F63 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC97Q96F63 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC97Q96F63 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC97Q96F63 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC97Q96F63 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCDC97Q96F63 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC97Q96F63 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC97Q96F63 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC97Q96F63 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC97Q96F63 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC97Q96F63 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC97Q96F63 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC97Q96F63 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCDC97Q96F63 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC97Q96F63 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC97Q96F63 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC97Q96F63 CICP8-201ENST00000455800 2813 ntBASIC15.1■□□□□ 0.01
CCDC97Q96F63 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC97Q96F63 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC97Q96F63 LILRP1-201ENST00000444199 1370 ntBASIC15.1■□□□□ 0.01
CCDC97Q96F63 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 AL805961.2-201ENST00000642139 4817 ntBASIC15.09■□□□□ 0.01
CCDC97Q96F63 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 KLF2P2-201ENST00000416807 1039 ntBASIC15.09■□□□□ 0.01
CCDC97Q96F63 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 CSF2RBP1-201ENST00000447905 391 ntBASIC15.09■□□□□ 0.01
CCDC97Q96F63 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 AC106760.1-201ENST00000508690 800 ntBASIC15.09■□□□□ 0.01
CCDC97Q96F63 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 PRSS30P-206ENST00000641773 873 ntBASIC15.09■□□□□ 0.01
CCDC97Q96F63 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
CCDC97Q96F63 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC97Q96F63 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms