Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 FO681548.1-201ENST00000455617 1132 ntBASIC14.11□□□□□ -0.15
VPS33AQ96AX1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 AL359711.2-201ENST00000563105 872 ntBASIC14.11□□□□□ -0.15
VPS33AQ96AX1 RRP7BP-205ENST00000566851 833 ntBASIC14.11□□□□□ -0.15
VPS33AQ96AX1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 AC023511.2-201ENST00000618803 211 ntBASIC14.11□□□□□ -0.15
VPS33AQ96AX1 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 MEP1AP4-201ENST00000423244 1087 ntBASIC14.1□□□□□ -0.15
VPS33AQ96AX1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 AL512638.1-201ENST00000457493 794 ntBASIC14.1□□□□□ -0.15
VPS33AQ96AX1 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 AC093512.1-201ENST00000617969 520 ntBASIC14.1□□□□□ -0.15
VPS33AQ96AX1 AL603764.1-201ENST00000636452 321 ntBASIC14.1□□□□□ -0.15
VPS33AQ96AX1 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms