Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 COL6A4P2-202ENST00000504443 2753 ntBASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 CHCHD2P3-201ENST00000603038 451 ntBASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 AC009118.2-201ENST00000613275 655 ntBASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 AC114271.1-201ENST00000612689 2813 ntBASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 RN7SKP175-201ENST00000408472 289 ntBASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 AL162726.2-201ENST00000438986 1017 ntBASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 ELK1P1-201ENST00000485699 580 ntBASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 AC005586.2-201ENST00000563946 837 ntBASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 AC009486.1-201ENST00000569860 813 ntBASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 BAP1-211ENST00000615113 489 ntBASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 CU634019.7-201ENST00000624153 1185 ntBASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 FP236241.2-201ENST00000624906 1185 ntBASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 AC007326.2-201ENST00000624224 7579 ntBASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 AC126335.2-201ENST00000623362 4637 ntBASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC44A1Q8WWI5 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
SLC44A1Q8WWI5 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SLC44A1Q8WWI5 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC44A1Q8WWI5 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SLC44A1Q8WWI5 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC44A1Q8WWI5 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC44A1Q8WWI5 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms