Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGB4Q8WW32 AC138035.3-201ENST00000622706 2791 ntBASIC14.62□□□□□ -0.07
HMGB4Q8WW32 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 AC006504.5-208ENST00000588784 2401 ntBASIC14.61□□□□□ -0.07
HMGB4Q8WW32 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 FTH1P22-201ENST00000456305 520 ntBASIC14.61□□□□□ -0.07
HMGB4Q8WW32 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 AC130709.1-201ENST00000484779 1212 ntBASIC14.61□□□□□ -0.07
HMGB4Q8WW32 CTBP2P4-201ENST00000513884 920 ntBASIC14.61□□□□□ -0.07
HMGB4Q8WW32 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 AC104640.1-201ENST00000562617 2109 ntBASIC14.61□□□□□ -0.07
HMGB4Q8WW32 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 AC124068.2-201ENST00000569473 1109 ntBASIC14.61□□□□□ -0.07
HMGB4Q8WW32 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 AC107464.3-201ENST00000609172 737 ntBASIC14.61□□□□□ -0.07
HMGB4Q8WW32 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 AL365209.1-201ENST00000624418 6473 ntBASIC14.61□□□□□ -0.07
HMGB4Q8WW32 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 AC139712.1-201ENST00000378256 1875 ntBASIC14.61□□□□□ -0.07
HMGB4Q8WW32 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HMGB4Q8WW32 MARK2P16-201ENST00000605714 1723 ntBASIC14.61□□□□□ -0.07
HMGB4Q8WW32 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 KRT17P5-201ENST00000332088 839 ntBASIC14.6□□□□□ -0.07
HMGB4Q8WW32 AC012362.1-201ENST00000434906 739 ntBASIC14.6□□□□□ -0.07
HMGB4Q8WW32 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 AC018463.1-201ENST00000456674 917 ntBASIC14.6□□□□□ -0.07
HMGB4Q8WW32 RPL18AP3-201ENST00000462885 528 ntBASIC14.6□□□□□ -0.07
HMGB4Q8WW32 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 AP003398.1-201ENST00000531124 318 ntBASIC14.6□□□□□ -0.07
HMGB4Q8WW32 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 AC073911.3-201ENST00000624401 631 ntBASIC14.6□□□□□ -0.07
HMGB4Q8WW32 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.6□□□□□ -0.07
HMGB4Q8WW32 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.59□□□□□ -0.07
HMGB4Q8WW32 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
HMGB4Q8WW32 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HMGB4Q8WW32 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGB4Q8WW32 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGB4Q8WW32 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HMGB4Q8WW32 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HMGB4Q8WW32 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.59□□□□□ -0.07
HMGB4Q8WW32 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGB4Q8WW32 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms